Variant report

Variant	rs7650725
Chromosome Location	chr3:133401851-133401852
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10512903	0.80[EUR][1000 genomes]
rs10512907	0.82[EUR][1000 genomes]
rs10512908	0.82[EUR][1000 genomes]
rs10512909	0.82[EUR][1000 genomes]
rs11706586	0.89[EUR][1000 genomes]
rs11708197	0.82[EUR][1000 genomes]
rs11708532	0.84[EUR][1000 genomes]
rs11708565	0.84[EUR][1000 genomes]
rs11709132	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11709349	0.80[EUR][1000 genomes]
rs11709461	0.88[EUR][1000 genomes]
rs11709940	0.82[EUR][1000 genomes]
rs11710111	0.82[EUR][1000 genomes]
rs11712672	0.82[EUR][1000 genomes]
rs11713205	0.80[EUR][1000 genomes]
rs11713248	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11714392	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11714422	0.80[EUR][1000 genomes]
rs11715407	0.82[EUR][1000 genomes]
rs11715435	0.80[EUR][1000 genomes]
rs11715615	0.82[EUR][1000 genomes]
rs11716197	0.82[EUR][1000 genomes]
rs11716388	0.82[EUR][1000 genomes]
rs11716415	0.82[EUR][1000 genomes]
rs11717424	0.82[EUR][1000 genomes]
rs11717902	0.90[EUR][1000 genomes]
rs11718050	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11718255	0.80[EUR][1000 genomes]
rs11719366	0.82[EUR][1000 genomes]
rs11719585	0.82[EUR][1000 genomes]
rs11719687	0.84[EUR][1000 genomes]
rs16840594	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs16840595	0.99[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17301521	0.82[EUR][1000 genomes]
rs17301766	0.82[EUR][1000 genomes]
rs17301889	0.82[EUR][1000 genomes]
rs17373726	0.82[EUR][1000 genomes]
rs28846461	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56323915	0.84[EUR][1000 genomes]
rs62282415	0.80[EUR][1000 genomes]
rs62282417	0.81[EUR][1000 genomes]
rs62282418	0.82[EUR][1000 genomes]
rs62282419	0.82[EUR][1000 genomes]
rs62282420	0.82[EUR][1000 genomes]
rs62282421	0.82[EUR][1000 genomes]
rs62282424	0.82[EUR][1000 genomes]
rs62282425	0.82[EUR][1000 genomes]
rs62282427	0.84[EUR][1000 genomes]
rs62282428	0.83[EUR][1000 genomes]
rs62282429	0.84[EUR][1000 genomes]
rs62282431	0.84[EUR][1000 genomes]
rs62282451	0.84[EUR][1000 genomes]
rs62282452	0.84[EUR][1000 genomes]
rs62282453	0.84[EUR][1000 genomes]
rs62282454	0.85[EUR][1000 genomes]
rs62282456	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6765265	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7349558	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7630957	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7653808	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516081	chr3:133399702-133412094	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133393800-133406800	Weak transcription	Brain Substantia Nigra	brain

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