Variant report

Variant	rs765823
Chromosome Location	chr11:74902048-74902049
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:74899162..74902723-chr11:74903689..74908319,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000137491	Chromatin interaction

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1109407	1.00[MEX][hapmap]
rs11236363	1.00[MEX][hapmap]
rs11236364	1.00[MEX][hapmap]
rs11823030	0.82[CEU][hapmap];0.82[EUR][1000 genomes]
rs12289885	0.82[CEU][hapmap]
rs1676876	0.82[CEU][hapmap];1.00[CHB][hapmap]
rs17133742	1.00[MEX][hapmap]
rs17133760	0.82[CEU][hapmap]
rs17133809	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17133815	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.93[ASN][1000 genomes]
rs17133858	0.82[CEU][hapmap];1.00[CHB][hapmap]
rs2306167	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2306168	0.82[EUR][1000 genomes]
rs3781725	0.82[EUR][1000 genomes]
rs3824904	0.82[CEU][hapmap]
rs41298117	0.93[ASN][1000 genomes]
rs4362167	0.82[CEU][hapmap];1.00[CHB][hapmap]
rs58941788	0.93[ASN][1000 genomes]
rs61555831	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7110250	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7118873	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap]
rs72998556	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72998568	0.93[ASN][1000 genomes]
rs73488755	0.82[EUR][1000 genomes]
rs765824	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:47 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74876200-74906200	Weak transcription	Spleen	Spleen
2	chr11:74880800-74911000	Weak transcription	Gastric	stomach
3	chr11:74881200-74905600	Weak transcription	Pancreas	Pancrea
4	chr11:74881600-74916000	Weak transcription	Small Intestine	intestine
5	chr11:74887000-74902800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr11:74892600-74914200	Strong transcription	Duodenum Mucosa	Duodenum
7	chr11:74894600-74904200	Enhancers	Placenta	Placenta
8	chr11:74896400-74902200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr11:74897800-74902200	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr11:74897800-74902200	Strong transcription	Fetal Intestine Large	intestine
11	chr11:74898400-74907000	Genic enhancers	Liver	Liver
12	chr11:74898600-74904000	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr11:74899000-74903000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr11:74899000-74903400	Enhancers	Adipose Nuclei	Adipose
15	chr11:74900200-74907800	Enhancers	Fetal Muscle Trunk	muscle
16	chr11:74900200-74908200	Enhancers	Fetal Muscle Leg	muscle
17	chr11:74900400-74902400	Weak transcription	Brain Hippocampus Middle	brain
18	chr11:74901000-74902200	Enhancers	Fetal Stomach	stomach
19	chr11:74901000-74903200	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr11:74901000-74903200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
21	chr11:74901000-74903200	Enhancers	HepG2	liver
22	chr11:74901200-74902600	Enhancers	Colon Smooth Muscle	Colon
23	chr11:74901200-74902600	Genic enhancers	Lung	lung
24	chr11:74901200-74902600	Enhancers	Right Atrium	heart
25	chr11:74901200-74902600	Enhancers	Skeletal Muscle Male	skeletal muscle
26	chr11:74901200-74903000	Genic enhancers	Colonic Mucosa	Colon
27	chr11:74901200-74903000	Enhancers	Esophagus	oesophagus
28	chr11:74901200-74903000	Enhancers	Skeletal Muscle Female	skeletal muscle
29	chr11:74901200-74903000	Enhancers	Stomach Smooth Muscle	stomach
30	chr11:74901400-74902600	Enhancers	Left Ventricle	heart
31	chr11:74901400-74903000	Genic enhancers	Fetal Intestine Small	intestine
32	chr11:74901400-74903000	Enhancers	Stomach Mucosa	stomach
33	chr11:74901600-74902400	Enhancers	Rectal Smooth Muscle	rectum
34	chr11:74901600-74902600	Genic enhancers	Rectal Mucosa Donor 31	rectum
35	chr11:74901600-74902600	Enhancers	Right Ventricle	heart
36	chr11:74901600-74903000	Enhancers	Fetal Thymus	thymus
37	chr11:74901800-74902400	Enhancers	Fetal Brain Male	brain
38	chr11:74902000-74902400	Bivalent Enhancer	Brain Inferior Temporal Lobe	brain
39	chr11:74902000-74902400	Enhancers	Rectal Mucosa Donor 29	rectum
40	chr11:74902000-74902600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr11:74902000-74903000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr11:74902000-74903000	Enhancers	Duodenum Smooth Muscle	Duodenum
43	chr11:74902000-74903200	Enhancers	H1 Cell Line	embryonic stem cell
44	chr11:74902000-74903200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr11:74902000-74903200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
46	chr11:74902000-74903600	Enhancers	ES-I3 Cell Line	embryonic stem cell
47	chr11:74902000-74903600	Enhancers	iPS-18 Cell Line	embryonic stem cell

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