Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:74790381-74798090	K562	blood:	n/a	n/a

Variant related genes	Relation type
NPM1P50	TF binding region

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10501421	1.00[CHB][hapmap]
rs11236293	1.00[ASN][1000 genomes]
rs11236368	1.00[CHB][hapmap]
rs12271960	1.00[ASN][1000 genomes]
rs12273852	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12275050	1.00[ASN][1000 genomes]
rs12275982	1.00[CHB][hapmap]
rs12290239	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12292428	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12295546	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs13343191	1.00[CHB][hapmap]
rs1439677	1.00[ASN][1000 genomes]
rs17133760	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[EUR][1000 genomes]
rs17133809	0.82[CEU][hapmap]
rs7110250	0.82[CEU][hapmap]
rs7111955	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs72992687	1.00[ASN][1000 genomes]
rs72994528	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73498736	1.00[ASN][1000 genomes]
rs73498737	1.00[ASN][1000 genomes]
rs765823	0.82[CEU][hapmap]
rs765824	0.82[CEU][hapmap]
rs7947726	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897918	chr11:74757641-74798928	Enhancers Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
2	esv3478707	chr11:74782633-74842791	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
3	esv3478718	chr11:74782633-74842791	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
4	nsv975203	chr11:74786322-74799744	Weak transcription Strong transcription Enhancers Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74794200-74802000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:74794600-74797600	Weak transcription	K562	blood

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