Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:85308627..85310236-chr4:85312367..85314307,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10001112	1.00[EUR][1000 genomes]
rs10012964	1.00[EUR][1000 genomes]
rs11930802	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11934590	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1444955	1.00[EUR][1000 genomes]
rs1495144	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17008641	1.00[EUR][1000 genomes]
rs1994956	1.00[EUR][1000 genomes]
rs2083665	1.00[EUR][1000 genomes]
rs2119793	1.00[EUR][1000 genomes]
rs28431455	1.00[EUR][1000 genomes]
rs28523312	1.00[EUR][1000 genomes]
rs437295	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs438500	1.00[EUR][1000 genomes]
rs57866246	1.00[EUR][1000 genomes]
rs6825565	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6826424	1.00[EUR][1000 genomes]
rs6828383	1.00[EUR][1000 genomes]
rs6831720	1.00[EUR][1000 genomes]
rs72955273	1.00[EUR][1000 genomes]
rs7668554	1.00[EUR][1000 genomes]
rs7668852	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9990978	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829997	chr4:85244076-85409405	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv829998	chr4:85299693-85473450	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:85306800-85310200	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr4:85308000-85309600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr4:85309200-85309400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr4:85309200-85309800	Enhancers	iPS-18 Cell Line	embryonic stem cell

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