Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1018141	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10447377	0.83[GIH][hapmap]
rs11757171	0.83[GIH][hapmap]
rs11967781	0.91[CEU][hapmap]
rs11967833	1.00[CEU][hapmap];0.86[CHB][hapmap];0.85[JPT][hapmap];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12198936	1.00[CEU][hapmap];0.86[CHB][hapmap];0.85[JPT][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12208090	1.00[CEU][hapmap];0.93[GIH][hapmap];0.83[TSI][hapmap];0.87[EUR][1000 genomes]
rs12211545	0.86[EUR][1000 genomes]
rs12215844	0.81[EUR][1000 genomes]
rs12527497	0.88[EUR][1000 genomes]
rs12529276	0.88[EUR][1000 genomes]
rs1395632	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1395635	1.00[CEU][hapmap];0.85[CHB][hapmap];0.85[JPT][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34970714	0.88[EUR][1000 genomes]
rs4715469	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs540890	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6903280	0.87[EUR][1000 genomes]
rs6906715	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs7740110	0.86[CHD][hapmap]
rs7746312	0.91[CEU][hapmap]
rs9296764	0.91[CEU][hapmap];0.86[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs9464116	0.80[EUR][1000 genomes]
rs9474944	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026626	chr6:54506752-54531961	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54506800-54509400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:54507000-54511800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr6:54507600-54509600	Weak transcription	Aorta	Aorta

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