Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1018074	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10263495	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10273775	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10276955	0.87[ASN][1000 genomes]
rs10278454	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10279761	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10500171	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1496540	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2888441	0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4146047	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4512308	0.81[ASN][1000 genomes]
rs4726821	0.98[EUR][1000 genomes]
rs6974986	0.80[EUR][1000 genomes]
rs7783508	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7795067	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7799140	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7807716	0.81[ASN][1000 genomes]
rs903899	0.94[EUR][1000 genomes]
rs924147	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9640495	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933033	chr7:146720301-147081560	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1033898	chr7:146721499-147081768	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
4	nsv889395	chr7:146848251-146969389	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
5	nsv889396	chr7:146854133-147035067	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv521548	chr7:146867339-146871913	Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:146867800-146868400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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