The 2.0 version of rSNPBase

Variant report

Variant rs7917130
Chromosome Location chr10:22877112-22877113
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22825600-22888000 Weak transcription HMEC breast
2 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr10:22844200-22877200 Weak transcription Colon Smooth Muscle Colon
4 chr10:22844200-22904800 Weak transcription Rectal Smooth Muscle rectum
5 chr10:22849600-22879000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr10:22850400-22878800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr10:22850400-22882000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr10:22850400-22882600 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr10:22853600-22878600 Weak transcription HUVEC blood vessel
10 chr10:22854000-22879000 Weak transcription Muscle Satellite Cultured Cells --
11 chr10:22854200-22887400 Weak transcription NHDF-Ad bronchial
12 chr10:22854200-22887400 Weak transcription NHEK skin
13 chr10:22855600-22882600 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr10:22855800-22879800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr10:22855800-22881400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr10:22856600-22899200 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr10:22856800-22888200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr10:22857000-22888200 Weak transcription Small Intestine intestine
19 chr10:22857200-22879000 Weak transcription H9 Cell Line embryonic stem cell
20 chr10:22858200-22904000 Weak transcription Colonic Mucosa Colon
21 chr10:22860400-22882200 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr10:22860600-22878000 Weak transcription Fetal Brain Male brain
23 chr10:22862200-22880400 Weak transcription Fetal Kidney kidney
24 chr10:22862200-22885800 Weak transcription NHLF lung
25 chr10:22862400-22879000 Weak transcription Fetal Lung lung
26 chr10:22862400-22886000 Weak transcription HSMMtube muscle
27 chr10:22862400-22887400 Weak transcription A549 lung
28 chr10:22862400-22902000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr10:22863800-22886400 Strong transcription Primary hematopoietic stem cells short term culture blood
30 chr10:22864000-22882400 Strong transcription Primary T cells from cord blood blood
31 chr10:22866600-22887600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr10:22866600-22893800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr10:22870000-22880000 Weak transcription Psoas Muscle Psoas
34 chr10:22870000-22885600 Weak transcription NH-A brain
35 chr10:22870200-22877200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr10:22870200-22878800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr10:22870200-22879800 Weak transcription Esophagus oesophagus
38 chr10:22870200-22879800 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr10:22870200-22893400 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr10:22870400-22878800 Weak transcription Pancreas Pancrea
41 chr10:22870400-22879000 Weak transcription Fetal Muscle Trunk muscle
42 chr10:22870400-22895200 Weak transcription HepG2 liver
43 chr10:22871200-22879400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr10:22871200-22882200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr10:22871200-22882600 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr10:22872000-22887600 Strong transcription Primary monocytes fromperipheralblood blood
47 chr10:22872600-22879600 Weak transcription Gastric stomach
48 chr10:22872600-22881400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr10:22873800-22879000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr10:22874000-22878800 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015