The 2.0 version of rSNPBase

Variant report

Variant rs7917460
Chromosome Location chr10:22884648-22884649
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22825600-22888000 Weak transcription HMEC breast
2 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr10:22844200-22904800 Weak transcription Rectal Smooth Muscle rectum
4 chr10:22854200-22887400 Weak transcription NHDF-Ad bronchial
5 chr10:22854200-22887400 Weak transcription NHEK skin
6 chr10:22856600-22899200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr10:22856800-22888200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr10:22857000-22888200 Weak transcription Small Intestine intestine
9 chr10:22858200-22904000 Weak transcription Colonic Mucosa Colon
10 chr10:22862200-22885800 Weak transcription NHLF lung
11 chr10:22862400-22886000 Weak transcription HSMMtube muscle
12 chr10:22862400-22887400 Weak transcription A549 lung
13 chr10:22862400-22902000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr10:22863800-22886400 Strong transcription Primary hematopoietic stem cells short term culture blood
15 chr10:22866600-22887600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr10:22866600-22893800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr10:22870000-22885600 Weak transcription NH-A brain
18 chr10:22870200-22893400 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr10:22870400-22895200 Weak transcription HepG2 liver
20 chr10:22872000-22887600 Strong transcription Primary monocytes fromperipheralblood blood
21 chr10:22874000-22888200 Weak transcription Placenta Placenta
22 chr10:22875800-22888000 Weak transcription Stomach Mucosa stomach
23 chr10:22876600-22885600 Strong transcription GM12878-XiMat blood
24 chr10:22877200-22896400 Weak transcription Fetal Intestine Large intestine
25 chr10:22877400-22890200 Weak transcription Right Ventricle heart
26 chr10:22877600-22893400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr10:22878600-22886000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
28 chr10:22879000-22894000 Genic enhancers Primary T cells fromperipheralblood blood
29 chr10:22879400-22885400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr10:22879400-22888400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr10:22879600-22887400 Weak transcription HUVEC blood vessel
32 chr10:22880000-22885400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr10:22880000-22886000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr10:22880000-22887400 Weak transcription Muscle Satellite Cultured Cells --
35 chr10:22880000-22890600 Weak transcription H9 Cell Line embryonic stem cell
36 chr10:22880000-22906800 Weak transcription Colon Smooth Muscle Colon
37 chr10:22880200-22885600 Weak transcription Brain Angular Gyrus brain
38 chr10:22880200-22885600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr10:22880200-22886000 Weak transcription Pancreas Pancrea
40 chr10:22880200-22887400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr10:22880200-22889400 Weak transcription Aorta Aorta
42 chr10:22880200-22890000 Weak transcription Stomach Smooth Muscle stomach
43 chr10:22880200-22890400 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr10:22880200-22893400 Weak transcription Ovary ovary
45 chr10:22880200-22893800 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr10:22880200-22895200 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr10:22880200-22896200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr10:22880200-22897000 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr10:22880400-22885600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr10:22880400-22885600 Weak transcription Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015