Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81071464..81074082-chr14:81074931..81076557,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10138951	1.00[CEU][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11620910	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs11623496	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11624616	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs12323598	0.99[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17110868	0.88[CEU][hapmap];0.94[EUR][1000 genomes]
rs55910446	0.82[EUR][1000 genomes]
rs57289554	0.94[EUR][1000 genomes]
rs57315708	0.90[EUR][1000 genomes]
rs57759210	0.96[EUR][1000 genomes]
rs61391568	0.96[EUR][1000 genomes]
rs6574591	0.88[CEU][hapmap];0.98[EUR][1000 genomes]
rs7155869	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7156847	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs7157244	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs7159335	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs73328690	0.91[EUR][1000 genomes]
rs8008286	1.00[CEU][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs8014976	0.98[EUR][1000 genomes]
rs8016841	0.87[CEU][hapmap];0.94[EUR][1000 genomes]
rs8017020	0.88[CEU][hapmap];0.98[EUR][1000 genomes]
rs8018254	0.85[YRI][hapmap]
rs9323687	0.86[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81062200-81082200	Weak transcription	Dnd41	blood
2	chr14:81069600-81073800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr14:81070000-81072000	Weak transcription	Brain Hippocampus Middle	brain
4	chr14:81070000-81072000	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr14:81070200-81072000	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr14:81070600-81072600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr14:81071800-81072000	Enhancers	Brain Substantia Nigra	brain
8	chr14:81071800-81072200	Enhancers	Muscle Satellite Cultured Cells	--
9	chr14:81071800-81072600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr14:81071800-81073000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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