Variant report

Variant	rs8016841
Chromosome Location	chr14:81080398-81080399
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81075319..81077418-chr14:81079123..81081073,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10138951	0.88[CEU][hapmap]
rs10139152	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10149999	0.83[ASN][1000 genomes]
rs10151794	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10498550	1.00[JPT][hapmap]
rs11620910	0.88[CEU][hapmap];0.92[EUR][1000 genomes]
rs11624616	0.88[CEU][hapmap];0.96[EUR][1000 genomes]
rs12323598	0.91[EUR][1000 genomes]
rs12586869	1.00[JPT][hapmap]
rs12588767	1.00[JPT][hapmap]
rs17110868	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17111040	1.00[JPT][hapmap]
rs17111069	1.00[JPT][hapmap]
rs2371415	1.00[JPT][hapmap]
rs55859597	0.83[ASN][1000 genomes]
rs55910446	0.80[EUR][1000 genomes]
rs57289554	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs57315708	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57759210	0.91[EUR][1000 genomes]
rs61391568	0.91[EUR][1000 genomes]
rs6574591	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7151041	1.00[ASN][1000 genomes]
rs7156847	0.88[CEU][hapmap];0.96[EUR][1000 genomes]
rs7157244	0.88[CEU][hapmap];0.96[EUR][1000 genomes]
rs7159335	0.88[CEU][hapmap];0.96[EUR][1000 genomes]
rs73328690	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73330519	0.83[ASN][1000 genomes]
rs73330520	0.83[ASN][1000 genomes]
rs74066058	1.00[ASN][1000 genomes]
rs8008286	0.88[CEU][hapmap]
rs8008763	0.87[CEU][hapmap];0.94[EUR][1000 genomes]
rs8014976	0.96[EUR][1000 genomes]
rs8016670	1.00[JPT][hapmap]
rs8017020	1.00[CEU][hapmap];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81062200-81082200	Weak transcription	Dnd41	blood
2	chr14:81076200-81086600	Weak transcription	A549	lung
3	chr14:81080000-81080800	Weak transcription	Psoas Muscle	Psoas

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