The 2.0 version of rSNPBase

Variant report

Variant rs8036648
Chromosome Location chr15:52027297-52027298
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52013600-52028200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr15:52013600-52028400 Weak transcription Fetal Brain Female brain
3 chr15:52013600-52028800 Weak transcription Fetal Muscle Trunk muscle
4 chr15:52019000-52028200 Weak transcription Brain Substantia Nigra brain
5 chr15:52020000-52028800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr15:52020200-52028000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr15:52020200-52029000 Weak transcription NH-A brain
8 chr15:52020400-52028000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr15:52023600-52028200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr15:52024200-52028000 Enhancers Primary monocytes fromperipheralblood blood
11 chr15:52024200-52028000 Weak transcription Hela-S3 cervix
12 chr15:52024200-52028400 Flanking Active TSS GM12878-XiMat blood
13 chr15:52024400-52027800 Enhancers Primary T killer memory cells from peripheral blood blood
14 chr15:52024400-52027800 Enhancers Brain Anterior Caudate brain
15 chr15:52024400-52028000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr15:52024400-52028400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr15:52024400-52028400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr15:52024400-52028400 Enhancers Fetal Thymus thymus
19 chr15:52024400-52028400 Enhancers Thymus Thymus
20 chr15:52024400-52028800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr15:52024400-52028800 Weak transcription Right Ventricle heart
22 chr15:52024600-52027600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr15:52024600-52027600 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr15:52024600-52027600 Enhancers Primary T helper naive cells fromperipheralblood blood
25 chr15:52024600-52027600 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr15:52024600-52027800 Enhancers Primary hematopoietic stem cells blood
27 chr15:52024600-52027800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr15:52024600-52027800 Enhancers Primary T regulatory cells fromperipheralblood blood
29 chr15:52024600-52028000 Enhancers Primary T helper cells fromperipheralblood blood
30 chr15:52024600-52028000 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr15:52024600-52028200 Enhancers Primary T cells fromperipheralblood blood
32 chr15:52024600-52028200 Weak transcription NHDF-Ad bronchial
33 chr15:52024600-52028200 Weak transcription NHLF lung
34 chr15:52024600-52028400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr15:52024600-52028400 Weak transcription Aorta Aorta
36 chr15:52024600-52028400 Weak transcription Fetal Muscle Leg muscle
37 chr15:52024600-52028400 Weak transcription Gastric stomach
38 chr15:52024600-52028400 Weak transcription NHEK skin
39 chr15:52024600-52028600 Weak transcription Fetal Stomach stomach
40 chr15:52024600-52028800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr15:52024600-52028800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr15:52024600-52028800 Weak transcription Osteobl bone
43 chr15:52024600-52029000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr15:52024800-52027600 Genic enhancers Primary B cells from peripheral blood blood
45 chr15:52024800-52027800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
46 chr15:52024800-52028000 Weak transcription Fetal Intestine Small intestine
47 chr15:52024800-52028000 Weak transcription Rectal Smooth Muscle rectum
48 chr15:52024800-52028200 Weak transcription Adipose Nuclei Adipose
49 chr15:52024800-52028400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr15:52024800-52028400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015