Variant report

Variant rs8110954
Chromosome Location chr19:53339139-53339140
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53333600-53345000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:53335000-53342800 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr19:53337000-53340800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr19:53337000-53340800 Weak transcription Ovary ovary
5 chr19:53337400-53340600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr19:53337400-53340600 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr19:53337400-53340600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr19:53337400-53340800 Weak transcription Brain Hippocampus Middle brain
9 chr19:53337400-53340800 Weak transcription Fetal Brain Female brain
10 chr19:53337400-53340800 Weak transcription Dnd41 blood
11 chr19:53337600-53342200 Weak transcription Brain Germinal Matrix brain
12 chr19:53337600-53342200 Weak transcription Fetal Stomach stomach
13 chr19:53337800-53341400 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr19:53337800-53342200 Weak transcription H9 Cell Line embryonic stem cell
15 chr19:53337800-53342400 Weak transcription Right Ventricle heart
16 chr19:53338000-53340800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr19:53338000-53341400 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr19:53338000-53342400 Weak transcription H1 Cell Line embryonic stem cell
19 chr19:53338000-53342600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr19:53338000-53343400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr19:53338200-53340600 Weak transcription Rectal Smooth Muscle rectum
22 chr19:53338200-53341400 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr19:53338200-53342600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr19:53338600-53339200 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr19:53338800-53342200 Weak transcription Fetal Muscle Trunk muscle
26 chr19:53338800-53342600 Weak transcription Brain Substantia Nigra brain
27 chr19:53338800-53349200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr19:53338800-53352000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr19:53338800-53355000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr19:53339000-53339800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
31 chr19:53339000-53339800 Enhancers K562 blood
32 chr19:53339000-53340200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr19:53339000-53342400 Weak transcription Fetal Muscle Leg muscle
34 chr19:53339000-53345800 Strong transcription Placenta Placenta
35 chr19:53339000-53357600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr19:53339000-53357800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
37 chr19:53339000-53359200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood

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