The 2.0 version of rSNPBase

Variant report

Variant rs828645
Chromosome Location chr6:72082926-72082927
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:72061600-72097000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:72071400-72085200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr6:72071600-72083600 Weak transcription Placenta Placenta
4 chr6:72075400-72087200 Weak transcription Fetal Heart heart
5 chr6:72076000-72083800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr6:72076000-72084000 Weak transcription Fetal Intestine Small intestine
7 chr6:72076000-72093400 Weak transcription Brain Hippocampus Middle brain
8 chr6:72076200-72083800 Weak transcription NH-A brain
9 chr6:72076200-72103200 Weak transcription Aorta Aorta
10 chr6:72076600-72083400 Weak transcription Adipose Nuclei Adipose
11 chr6:72076600-72087600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr6:72076600-72090200 Weak transcription Ovary ovary
13 chr6:72077000-72084000 Weak transcription Stomach Smooth Muscle stomach
14 chr6:72077600-72084000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr6:72077600-72085400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr6:72077600-72093400 Weak transcription Brain Anterior Caudate brain
17 chr6:72077600-72094800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr6:72077800-72083800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr6:72077800-72087800 Weak transcription Right Ventricle heart
20 chr6:72077800-72088000 Weak transcription Left Ventricle heart
21 chr6:72077800-72093000 Weak transcription Lung lung
22 chr6:72077800-72093200 Weak transcription Pancreas Pancrea
23 chr6:72077800-72097000 Weak transcription Psoas Muscle Psoas
24 chr6:72077800-72097200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr6:72078000-72083800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr6:72078200-72084000 Weak transcription NHDF-Ad bronchial
27 chr6:72078200-72095400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr6:72078400-72083600 Weak transcription A549 lung
29 chr6:72078400-72083800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr6:72078800-72083800 Weak transcription NHEK skin
31 chr6:72079800-72098800 Weak transcription Brain Substantia Nigra brain
32 chr6:72080200-72083400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr6:72080400-72084400 Strong transcription HSMM muscle
34 chr6:72081200-72084400 Strong transcription Muscle Satellite Cultured Cells --
35 chr6:72081200-72087800 Weak transcription HSMMtube muscle
36 chr6:72081400-72091400 Strong transcription Hela-S3 cervix
37 chr6:72081600-72083000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr6:72081600-72084400 Weak transcription Fetal Brain Male brain
39 chr6:72082000-72083600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr6:72082000-72087000 Weak transcription Fetal Kidney kidney
41 chr6:72082200-72083600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr6:72082200-72084000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr6:72082200-72090800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:72082400-72083400 Weak transcription HMEC breast
45 chr6:72082400-72083800 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr6:72082400-72083800 Weak transcription Fetal Lung lung
47 chr6:72082400-72088000 Weak transcription Liver Liver
48 chr6:72082600-72083800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr6:72082600-72093200 Weak transcription Osteobl bone
50 chr6:72082800-72085200 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015