The 2.0 version of rSNPBase

Variant report

Variant rs1192035
Chromosome Location chr6:72084412-72084413
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:72061600-72097000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr6:72071400-72085200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr6:72075400-72087200 Weak transcription Fetal Heart heart
4 chr6:72076000-72093400 Weak transcription Brain Hippocampus Middle brain
5 chr6:72076200-72103200 Weak transcription Aorta Aorta
6 chr6:72076600-72087600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr6:72076600-72090200 Weak transcription Ovary ovary
8 chr6:72077600-72085400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:72077600-72093400 Weak transcription Brain Anterior Caudate brain
10 chr6:72077600-72094800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr6:72077800-72087800 Weak transcription Right Ventricle heart
12 chr6:72077800-72088000 Weak transcription Left Ventricle heart
13 chr6:72077800-72093000 Weak transcription Lung lung
14 chr6:72077800-72093200 Weak transcription Pancreas Pancrea
15 chr6:72077800-72097000 Weak transcription Psoas Muscle Psoas
16 chr6:72077800-72097200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr6:72078200-72095400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr6:72079800-72098800 Weak transcription Brain Substantia Nigra brain
19 chr6:72081200-72087800 Weak transcription HSMMtube muscle
20 chr6:72081400-72091400 Strong transcription Hela-S3 cervix
21 chr6:72082000-72087000 Weak transcription Fetal Kidney kidney
22 chr6:72082200-72090800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr6:72082400-72088000 Weak transcription Liver Liver
24 chr6:72082600-72093200 Weak transcription Osteobl bone
25 chr6:72082800-72085200 Weak transcription HUVEC blood vessel
26 chr6:72082800-72086200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr6:72083400-72084600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:72083400-72087200 Enhancers HMEC breast
29 chr6:72083400-72094600 Weak transcription Fetal Intestine Large intestine
30 chr6:72083600-72084600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr6:72083800-72084600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:72083800-72097800 Weak transcription Placenta Placenta
33 chr6:72084200-72085200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr6:72084200-72087200 Weak transcription NHDF-Ad bronchial
35 chr6:72084200-72090800 Weak transcription NHLF lung
36 chr6:72084200-72097000 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr6:72084200-72106600 Weak transcription Fetal Muscle Trunk muscle
38 chr6:72084400-72085400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr6:72084400-72085400 Weak transcription A549 lung
40 chr6:72084400-72085400 Weak transcription NHEK skin
41 chr6:72084400-72086000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr6:72084400-72086200 Weak transcription HSMM muscle
43 chr6:72084400-72086600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:72084400-72086800 Weak transcription Muscle Satellite Cultured Cells --
45 chr6:72084400-72087600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:72084400-72087600 Weak transcription Fetal Muscle Leg muscle
47 chr6:72084400-72088000 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr6:72084400-72090400 Weak transcription Adipose Nuclei Adipose
49 chr6:72084400-72090400 Weak transcription NH-A brain
50 chr6:72084400-72092600 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015