Variant report

Variant	rs932113
Chromosome Location	chr2:180518352-180518353
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs1022311	1.00[CHB][hapmap]
rs10497544	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11901346	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs12373725	0.89[CHB][hapmap];0.92[JPT][hapmap]
rs12622727	1.00[CHB][hapmap]
rs12623583	0.94[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.92[ASN][1000 genomes]
rs13419649	0.94[CHB][hapmap];0.92[JPT][hapmap];0.83[ASN][1000 genomes]
rs13427033	0.94[CHB][hapmap]
rs1515287	0.94[CHB][hapmap]
rs1515289	0.94[CHB][hapmap];0.93[JPT][hapmap]
rs16866903	0.94[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.87[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs16866915	0.94[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.92[ASN][1000 genomes]
rs17820975	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs2292652	0.87[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.86[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3106689	0.88[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.97[ASN][1000 genomes]
rs3106725	0.86[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs3112968	0.94[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap]
rs3112970	0.94[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap]
rs34714722	0.93[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs58011887	0.82[ASN][1000 genomes]
rs59743027	0.91[ASN][1000 genomes]
rs62175163	0.93[ASN][1000 genomes]
rs62175164	0.90[ASN][1000 genomes]
rs62175165	0.90[ASN][1000 genomes]
rs62177571	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7421557	0.94[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap]
rs7558364	0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7558784	0.94[CHB][hapmap];0.93[JPT][hapmap]
rs7585897	0.90[ASN][1000 genomes]
rs7590028	0.88[CHB][hapmap];0.92[JPT][hapmap]
rs932115	0.94[CHB][hapmap];0.93[JPT][hapmap]
rs956261	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9989898	0.81[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180517400-180521400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr2:180518200-180518400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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