Variant report

No.	Distal block	Cell Line	Cell type
1	6:132269655-132282174..6:132373869-132383497	GM12878	blood:
2	6:132176847-132180372..6:132373869-132383497	K562	blood:
3	6:132182612-132191683..6:132373869-132383497	Hela-S3	cervix:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11154662	0.97[EUR][1000 genomes]
rs1206719	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs1206726	0.93[EUR][1000 genomes]
rs1206729	0.94[EUR][1000 genomes]
rs1206731	0.94[EUR][1000 genomes]
rs1206732	0.94[EUR][1000 genomes]
rs1206733	0.81[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs1206734	0.81[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs13437472	0.94[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs173055	0.94[AFR][1000 genomes]
rs2223259	0.91[CEU][hapmap];0.89[AFR][1000 genomes];0.99[EUR][1000 genomes]
rs2327198	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs233907	0.88[AFR][1000 genomes]
rs233909	0.94[AFR][1000 genomes]
rs233910	0.94[AFR][1000 genomes]
rs233935	0.94[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs233936	0.94[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs233939	0.88[AFR][1000 genomes]
rs4895927	0.95[CEU][hapmap];0.97[EUR][1000 genomes]
rs6569773	0.95[CEU][hapmap];0.97[EUR][1000 genomes]
rs6918708	0.94[EUR][1000 genomes]
rs6935514	0.95[CEU][hapmap];0.96[EUR][1000 genomes]
rs693712	0.94[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs6939234	0.95[CEU][hapmap];0.97[EUR][1000 genomes]
rs9321323	0.91[CEU][hapmap];0.83[AFR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427768	chr6:132300468-132398477	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132375000-132384800	Weak transcription	Pancreas	Pancrea
2	chr6:132376200-132380600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr6:132376600-132380200	Weak transcription	NHLF	lung
4	chr6:132376600-132384400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:132378600-132381800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr6:132379200-132380400	Enhancers	Colon Smooth Muscle	Colon
7	chr6:132379200-132381800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr6:132379200-132385600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:132379200-132386200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr6:132379400-132380400	Enhancers	Ovary	ovary
11	chr6:132379400-132380800	Enhancers	Osteobl	bone
12	chr6:132379400-132381000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr6:132379400-132383400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr6:132379400-132385600	Enhancers	NHDF-Ad	bronchial
15	chr6:132379600-132386200	Enhancers	Muscle Satellite Cultured Cells	--
16	chr6:132379800-132383600	Enhancers	Brain Germinal Matrix	brain
17	chr6:132379800-132384400	Weak transcription	Fetal Heart	heart
18	chr6:132380000-132380800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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