Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12527322	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16876112	0.81[YRI][hapmap]
rs2008075	0.81[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs28441171	0.86[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs66673460	0.90[AFR][1000 genomes]
rs67978363	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7760174	0.86[CHD][hapmap]
rs7763564	0.88[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs9296970	0.98[ASN][1000 genomes]
rs9296971	0.87[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9358051	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9370795	0.94[AFR][1000 genomes]
rs9370797	0.87[AFR][1000 genomes]
rs9370800	0.89[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9370801	1.00[CEU][hapmap];0.88[YRI][hapmap];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9383029	0.93[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.92[YRI][hapmap];0.90[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9383030	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9383032	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9396561	0.93[ASW][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.87[MEX][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9396564	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9476764	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830593	chr6:15049636-15244190	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1016007	chr6:15099585-15159098	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv2762580	chr6:15105917-15159110	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15143000-15144000	Enhancers	Fetal Lung	lung

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