Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:15133229..15135738-chr6:15147564..15149146,2	K562	blood:
2	chr6:15147856..15151805-chr6:15244004..15248641,4	MCF-7	breast:
3	chr6:15096022..15098594-chr6:15145992..15148961,2	K562	blood:

Variant related genes	Relation type
ENSG00000008083	Chromatin interaction
ENSG00000271888	Chromatin interaction

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11968363	0.80[ASN][1000 genomes]
rs34724062	0.80[ASN][1000 genomes]
rs66673460	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6900532	0.87[ASN][1000 genomes]
rs6905502	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6921572	0.95[ASN][1000 genomes]
rs6935115	0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs72832902	0.97[ASN][1000 genomes]
rs72834506	0.97[ASN][1000 genomes]
rs72834509	0.97[ASN][1000 genomes]
rs7747637	0.87[ASN][1000 genomes]
rs9349966	0.97[ASN][1000 genomes]
rs9349967	0.95[ASN][1000 genomes]
rs9358052	0.86[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9358054	0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9358055	0.95[ASN][1000 genomes]
rs9358056	0.97[ASN][1000 genomes]
rs9367864	0.97[ASN][1000 genomes]
rs9367865	0.98[ASN][1000 genomes]
rs9367866	0.97[ASN][1000 genomes]
rs9367867	0.97[ASN][1000 genomes]
rs9370795	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9370796	0.97[ASN][1000 genomes]
rs9370798	0.98[ASN][1000 genomes]
rs9370802	0.97[ASN][1000 genomes]
rs9383026	0.92[ASN][1000 genomes]
rs9383027	0.97[ASN][1000 genomes]
rs9383031	0.97[ASN][1000 genomes]
rs9396560	0.95[ASN][1000 genomes]
rs9396562	0.87[AFR][1000 genomes]
rs9396564	0.81[AFR][1000 genomes]
rs9396565	0.97[ASN][1000 genomes]
rs9396567	0.97[ASN][1000 genomes]
rs9396568	0.97[ASN][1000 genomes]
rs9396569	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830593	chr6:15049636-15244190	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1016007	chr6:15099585-15159098	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv2762580	chr6:15105917-15159110	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15145400-15148400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr6:15146400-15151000	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr6:15146600-15150600	Weak transcription	Primary monocytes fromperipheralblood	blood

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