Variant report

Variant	rs9472335
Chromosome Location	chr6:44709967-44709968
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44709340..44711190-chr6:45455747..45458398,2	K562	blood:

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs13202672	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs13206206	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs13206526	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1402599	0.85[ASN][1000 genomes]
rs1418435	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16869119	0.82[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16872574	0.85[ASN][1000 genomes]
rs1935549	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2139863	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs227830	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs227832	0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs227833	0.85[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs227835	0.87[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs227836	0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs227839	0.89[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs227840	0.87[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs227844	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs227845	0.88[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs227852	0.87[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs227853	0.87[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs227857	0.88[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2894599	0.85[ASN][1000 genomes]
rs34243039	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs34577161	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34776198	0.90[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs34817919	0.85[ASN][1000 genomes]
rs35376827	0.85[ASN][1000 genomes]
rs35856781	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs3799965	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3799966	0.85[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3799969	0.86[ASN][1000 genomes]
rs3799970	0.86[ASN][1000 genomes]
rs3799972	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs3799974	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs3823252	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs3997503	0.88[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4711797	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4714812	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4714825	0.85[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4714827	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs524492	0.83[ASN][1000 genomes]
rs542444	0.86[ASN][1000 genomes]
rs562016	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs609643	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs609699	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs66642874	0.85[ASN][1000 genomes]
rs67597621	0.83[ASN][1000 genomes]
rs720988	0.90[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs720989	0.87[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs72664272	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72664273	0.84[ASN][1000 genomes]
rs72664274	0.85[ASN][1000 genomes]
rs7746032	0.88[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7769218	0.90[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs9463017	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9463039	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9463040	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9472331	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9472376	0.85[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44706600-44710400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr6:44706800-44710400	Weak transcription	Duodenum Mucosa	Duodenum
3	chr6:44707600-44710000	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr6:44707800-44710000	Weak transcription	Fetal Intestine Small	intestine
5	chr6:44708000-44710000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr6:44708000-44710000	Weak transcription	Fetal Intestine Large	intestine
7	chr6:44709600-44710000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr6:44709800-44710800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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