Variant report

Variant	rs34817919
Chromosome Location	chr6:44766127-44766128
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44753701..44756475-chr6:44765560..44767104,2	K562	blood:
2	chr6:44763455..44766382-chr6:44767163..44768857,2	MCF-7	breast:

Extended variants
information (count: 96 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:96)

rs_ID	r²[population]
rs1023091	0.83[ASN][1000 genomes]
rs12190136	0.81[ASN][1000 genomes]
rs12525773	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12526755	0.86[ASN][1000 genomes]
rs12527908	0.89[ASN][1000 genomes]
rs12529522	0.87[ASN][1000 genomes]
rs12530016	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs12661902	0.84[ASN][1000 genomes]
rs12663530	0.86[ASN][1000 genomes]
rs12663798	0.86[ASN][1000 genomes]
rs1293457	0.81[ASN][1000 genomes]
rs1293467	0.81[ASN][1000 genomes]
rs13199289	0.81[ASN][1000 genomes]
rs13202672	0.97[ASN][1000 genomes]
rs13206526	0.93[ASN][1000 genomes]
rs13216967	0.84[ASN][1000 genomes]
rs1329715	0.86[ASN][1000 genomes]
rs1360195	0.86[ASN][1000 genomes]
rs1402599	0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1418435	0.85[ASN][1000 genomes]
rs1557143	0.81[ASN][1000 genomes]
rs16869119	0.97[ASN][1000 genomes]
rs16872574	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1891411	0.81[ASN][1000 genomes]
rs1891412	0.81[ASN][1000 genomes]
rs1935549	0.99[ASN][1000 genomes]
rs1935551	0.80[ASN][1000 genomes]
rs2139863	0.98[ASN][1000 genomes]
rs227857	0.84[ASN][1000 genomes]
rs2894599	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34243039	0.95[ASN][1000 genomes]
rs34286542	0.85[ASN][1000 genomes]
rs34776198	0.98[ASN][1000 genomes]
rs35103634	0.86[ASN][1000 genomes]
rs35687006	0.85[ASN][1000 genomes]
rs35704584	0.86[ASN][1000 genomes]
rs35856781	0.95[ASN][1000 genomes]
rs35908738	0.85[ASN][1000 genomes]
rs36105034	0.85[ASN][1000 genomes]
rs3799965	0.98[ASN][1000 genomes]
rs3799966	0.97[ASN][1000 genomes]
rs3799967	0.80[ASN][1000 genomes]
rs3799969	0.98[ASN][1000 genomes]
rs3799970	0.98[ASN][1000 genomes]
rs3799971	0.84[ASN][1000 genomes]
rs3799972	0.94[ASN][1000 genomes]
rs3799973	0.82[ASN][1000 genomes]
rs3799974	0.95[ASN][1000 genomes]
rs3799987	0.86[ASN][1000 genomes]
rs3823252	0.98[ASN][1000 genomes]
rs3846896	0.80[ASN][1000 genomes]
rs3997503	0.86[ASN][1000 genomes]
rs4475320	0.86[ASN][1000 genomes]
rs4512220	0.84[ASN][1000 genomes]
rs4711799	0.81[ASN][1000 genomes]
rs4714821	0.80[ASN][1000 genomes]
rs4714825	0.99[ASN][1000 genomes]
rs4714827	0.95[ASN][1000 genomes]
rs4714829	0.86[ASN][1000 genomes]
rs524492	0.90[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs542444	0.98[ASN][1000 genomes]
rs562016	0.99[ASN][1000 genomes]
rs59945128	0.86[ASN][1000 genomes]
rs609643	0.84[ASN][1000 genomes]
rs609699	0.84[ASN][1000 genomes]
rs66642874	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67597621	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs67911131	0.87[ASN][1000 genomes]
rs6904015	0.80[ASN][1000 genomes]
rs6904584	0.89[ASN][1000 genomes]
rs6910294	0.80[ASN][1000 genomes]
rs6910749	0.81[ASN][1000 genomes]
rs6919161	0.87[ASN][1000 genomes]
rs720988	0.98[ASN][1000 genomes]
rs720989	0.96[ASN][1000 genomes]
rs72664272	0.96[ASN][1000 genomes]
rs72664273	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72664274	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7746032	0.86[ASN][1000 genomes]
rs7754698	0.81[ASN][1000 genomes]
rs7769218	0.98[ASN][1000 genomes]
rs929614	0.81[ASN][1000 genomes]
rs9296450	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9357459	0.81[ASN][1000 genomes]
rs9369512	0.81[ASN][1000 genomes]
rs9369513	0.80[ASN][1000 genomes]
rs9369514	0.80[ASN][1000 genomes]
rs9369516	0.80[ASN][1000 genomes]
rs9395051	0.84[ASN][1000 genomes]
rs9463017	0.85[ASN][1000 genomes]
rs9463039	0.95[ASN][1000 genomes]
rs9463040	0.95[ASN][1000 genomes]
rs9472335	0.85[ASN][1000 genomes]
rs9472376	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9472414	0.87[ASN][1000 genomes]
rs9885796	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44761800-44776200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:44762000-44768000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:44765000-44766200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr6:44765000-44767200	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr6:44765200-44766600	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr6:44765200-44768800	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr6:44765800-44766200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr6:44766000-44767000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr6:44766000-44768000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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