The 2.0 version of rSNPBase

Variant report

Variant rs9475852
Chromosome Location chr6:57200593-57200594
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:57184200-57201200 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:57193000-57201000 Weak transcription Gastric stomach
3 chr6:57193000-57203000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:57193600-57207400 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr6:57194600-57201200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr6:57194600-57202000 Weak transcription Fetal Stomach stomach
7 chr6:57194600-57214800 Weak transcription Small Intestine intestine
8 chr6:57194600-57215200 Weak transcription Ovary ovary
9 chr6:57194600-57226200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:57194600-57244800 Weak transcription Spleen Spleen
11 chr6:57194800-57202000 Weak transcription Primary T cells fromperipheralblood blood
12 chr6:57194800-57202200 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr6:57194800-57206000 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr6:57194800-57211600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr6:57195000-57201400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr6:57195600-57201400 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr6:57195600-57202400 Weak transcription Duodenum Mucosa Duodenum
18 chr6:57195600-57204600 Weak transcription Colon Smooth Muscle Colon
19 chr6:57195600-57212600 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr6:57195600-57238400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr6:57196200-57204000 Weak transcription Brain Hippocampus Middle brain
22 chr6:57197200-57200800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr6:57197600-57201200 Weak transcription Liver Liver
24 chr6:57198200-57212400 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr6:57198800-57200600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
26 chr6:57199000-57213800 Weak transcription K562 blood
27 chr6:57199600-57201600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr6:57199600-57202000 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr6:57199600-57202600 Weak transcription HepG2 liver
30 chr6:57199600-57206000 Weak transcription Thymus Thymus
31 chr6:57199600-57206000 Weak transcription NHDF-Ad bronchial
32 chr6:57199600-57206800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr6:57199600-57207400 Weak transcription NH-A brain
34 chr6:57199600-57211800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr6:57199600-57213200 Weak transcription HSMM muscle
36 chr6:57199600-57213400 Weak transcription Fetal Thymus thymus
37 chr6:57199600-57214600 Weak transcription Muscle Satellite Cultured Cells --
38 chr6:57199600-57214800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr6:57199600-57215200 Weak transcription Osteobl bone
40 chr6:57199600-57221000 Weak transcription Hela-S3 cervix
41 chr6:57199600-57229000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr6:57199800-57201400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:57199800-57201400 Weak transcription A549 lung
44 chr6:57199800-57201800 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr6:57199800-57201800 Weak transcription Adipose Nuclei Adipose
46 chr6:57199800-57202000 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr6:57199800-57203400 Weak transcription H9 Cell Line embryonic stem cell
48 chr6:57199800-57204600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr6:57199800-57205800 Weak transcription Primary T cells from cord blood blood
50 chr6:57199800-57206200 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015