Variant report

Variant	rs9516858
Chromosome Location	chr13:97849951-97849952
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs7325530	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7329695	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[YRI][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9513218	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9516857	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9516860	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9516862	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9516863	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9516865	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9516866	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9516868	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9516869	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97843000-97850600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr13:97846200-97852400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr13:97846400-97858200	Weak transcription	Fetal Intestine Small	intestine
4	chr13:97847400-97858200	Weak transcription	HSMM	muscle
5	chr13:97847600-97850800	Weak transcription	Placenta	Placenta
6	chr13:97847600-97851200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr13:97847600-97851200	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr13:97848800-97850000	Enhancers	HUVEC	blood vessel
9	chr13:97849400-97855800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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