Variant report

Variant	rs9516863
Chromosome Location	chr13:97857617-97857618
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs7325530	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7329695	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7999029	1.00[ASN][1000 genomes]
rs9513218	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9516854	0.87[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs9516855	1.00[ASN][1000 genomes]
rs9516856	1.00[ASN][1000 genomes]
rs9516857	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9516858	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9516860	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9516862	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9516865	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9516866	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9516868	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9516869	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97846400-97858200	Weak transcription	Fetal Intestine Small	intestine
2	chr13:97847400-97858200	Weak transcription	HSMM	muscle
3	chr13:97852600-97858200	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr13:97853400-97857800	Weak transcription	HUVEC	blood vessel
5	chr13:97853400-97861600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr13:97857000-97861000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr13:97857200-97859000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr13:97857600-97859000	Enhancers	NH-A	brain
9	chr13:97857600-97859200	Enhancers	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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