Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-OLFM4-9	chr13:53984135-53985015	NONHSAT034018

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1342669	0.81[ASN][1000 genomes]
rs1373273	0.87[ASN][1000 genomes]
rs1373276	0.80[ASN][1000 genomes]
rs1373281	0.82[ASN][1000 genomes]
rs1443905	0.80[ASN][1000 genomes]
rs1443908	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1443917	0.92[ASN][1000 genomes]
rs2165985	0.87[ASN][1000 genomes]
rs2813573	0.82[ASN][1000 genomes]
rs4883678	0.86[CHB][hapmap]
rs4884463	0.88[ASN][1000 genomes]
rs7322098	0.87[ASN][1000 genomes]
rs7326482	0.89[ASN][1000 genomes]
rs7328151	0.82[ASN][1000 genomes]
rs7332332	0.97[ASN][1000 genomes]
rs7985119	0.80[ASN][1000 genomes]
rs7992723	0.92[CEU][hapmap];0.91[CHB][hapmap]
rs8001044	0.80[ASN][1000 genomes]
rs8002970	0.80[ASN][1000 genomes]
rs9316613	0.81[ASN][1000 genomes]
rs9536405	0.81[ASN][1000 genomes]
rs9536406	0.81[ASN][1000 genomes]
rs9536410	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9536411	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9568848	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050969	chr13:53665927-54064861	Bivalent Enhancer Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:53984000-53985600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr13:53984200-53985200	Enhancers	Gastric	stomach
3	chr13:53984400-53985200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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