Variant report

Variant	rs9570410
Chromosome Location	chr13:61541478-61541479
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs11148531	0.81[ASN][1000 genomes]
rs11840739	0.81[ASN][1000 genomes]
rs11840753	0.86[ASN][1000 genomes]
rs1394319	0.81[ASN][1000 genomes]
rs1410792	0.85[ASN][1000 genomes]
rs1410793	0.83[ASN][1000 genomes]
rs1504407	0.92[CEU][hapmap];0.82[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1504411	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1514540	0.83[AMR][1000 genomes]
rs1604858	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1606712	0.84[AMR][1000 genomes]
rs1818517	0.82[AMR][1000 genomes]
rs1857725	0.85[ASN][1000 genomes]
rs1877833	0.83[AMR][1000 genomes]
rs1949271	0.84[AMR][1000 genomes]
rs1949272	0.84[AMR][1000 genomes]
rs1983090	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2047902	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2047903	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2134867	0.81[AFR][1000 genomes]
rs2134871	0.83[ASN][1000 genomes]
rs2137844	0.87[EUR][1000 genomes]
rs2174313	0.81[ASN][1000 genomes]
rs2221400	0.82[ASN][1000 genomes]
rs302892	0.82[AFR][1000 genomes]
rs4086378	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71211318	0.92[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7140034	0.81[ASN][1000 genomes]
rs7320944	0.92[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7336402	0.87[EUR][1000 genomes]
rs9528262	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9528268	0.92[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs9528269	0.92[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs9528270	0.85[AMR][1000 genomes]
rs9538975	0.81[EUR][1000 genomes]
rs9538981	0.91[CEU][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9538984	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9538990	0.81[AFR][1000 genomes]
rs9538992	0.81[AFR][1000 genomes]
rs9538993	0.83[AFR][1000 genomes]
rs9538996	0.90[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs9538997	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs9539003	0.83[AMR][1000 genomes]
rs9563848	0.81[ASN][1000 genomes]
rs9570403	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9570404	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9598189	0.81[ASN][1000 genomes]
rs9598204	0.85[ASN][1000 genomes]
rs974820	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832624	chr13:61383648-61553974	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:61539400-61543600	Weak transcription	Fetal Heart	heart

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