Variant report

Variant	rs9647058
Chromosome Location	chr21:16123081-16123082
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr21:16121771..16124126-chr21:16124778..16126464,2	K562	blood:
2	chr1:11967840..11969842-chr21:16122352..16125049,2	K562	blood:
3	chr21:16117024..16119518-chr21:16121656..16124213,2	K562	blood:

Variant related genes	Relation type
ENSG00000199347	Chromatin interaction
ENSG00000232884	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1556282	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1882871	0.82[EUR][1000 genomes]
rs1882872	0.83[EUR][1000 genomes]
rs1882873	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1882874	0.83[EUR][1000 genomes]
rs2142229	0.83[EUR][1000 genomes]
rs2178897	0.83[EUR][1000 genomes]
rs2403805	0.83[EUR][1000 genomes]
rs2822891	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2822892	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2822894	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2822897	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2822900	0.87[EUR][1000 genomes]
rs2822902	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2822903	0.85[EUR][1000 genomes]
rs2822905	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs36073527	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56216385	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7275790	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7275823	0.86[EUR][1000 genomes]
rs7277937	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7280121	0.83[EUR][1000 genomes]
rs7280294	0.86[EUR][1000 genomes]
rs7281062	0.82[EUR][1000 genomes]
rs7283943	0.85[EUR][1000 genomes]
rs8130955	0.83[EUR][1000 genomes]
rs8133806	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8134576	0.82[EUR][1000 genomes]
rs954825	0.82[EUR][1000 genomes]
rs9636594	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9636595	0.83[EUR][1000 genomes]
rs9636841	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9636842	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9636843	0.83[EUR][1000 genomes]
rs9977329	0.86[EUR][1000 genomes]
rs9983631	0.86[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16118600-16124000	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr21:16122400-16123200	Enhancers	Dnd41	blood
3	chr21:16122600-16125600	Active TSS	K562	blood

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