Variant report

Variant	rs9663254
Chromosome Location	chr10:22743996-22743997
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22715881..22717864-chr10:22742610..22744631,2	K562	blood:
2	chr10:22633393..22635015-chr10:22743176..22745218,2	K562	blood:

Variant related genes	Relation type
ENSG00000077327	Chromatin interaction

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs11013010	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11817873	0.94[EUR][1000 genomes]
rs12246511	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12253249	0.81[EUR][1000 genomes]
rs12264748	1.00[EUR][1000 genomes]
rs1418377	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs16922235	0.80[EUR][1000 genomes]
rs28496146	0.86[EUR][1000 genomes]
rs3004	0.94[EUR][1000 genomes]
rs57847001	0.86[EUR][1000 genomes]
rs58552927	0.93[EUR][1000 genomes]
rs58884708	0.80[EUR][1000 genomes]
rs60317615	0.87[EUR][1000 genomes]
rs60602527	0.86[EUR][1000 genomes]
rs60837021	0.86[EUR][1000 genomes]
rs6482213	0.94[EUR][1000 genomes]
rs6482214	0.94[EUR][1000 genomes]
rs6482215	0.94[EUR][1000 genomes]
rs6482217	0.88[EUR][1000 genomes]
rs7068522	1.00[EUR][1000 genomes]
rs7074430	0.86[EUR][1000 genomes]
rs7078770	1.00[EUR][1000 genomes]
rs7079531	0.94[EUR][1000 genomes]
rs7087672	0.87[EUR][1000 genomes]
rs7089276	0.81[EUR][1000 genomes]
rs7097932	1.00[EUR][1000 genomes]
rs73596598	0.86[EUR][1000 genomes]
rs73596599	0.86[EUR][1000 genomes]
rs73596601	0.86[EUR][1000 genomes]
rs73598512	0.87[EUR][1000 genomes]
rs73598513	0.94[EUR][1000 genomes]
rs74123055	0.81[EUR][1000 genomes]
rs7895113	0.93[EUR][1000 genomes]
rs7901797	0.93[EUR][1000 genomes]
rs7904006	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7904821	0.87[EUR][1000 genomes]
rs7907396	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7914254	0.94[EUR][1000 genomes]
rs7914800	1.00[EUR][1000 genomes]
rs9665348	1.00[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22742800-22744800	Enhancers	Primary B cells from peripheral blood	blood
2	chr10:22743000-22744400	Enhancers	K562	blood
3	chr10:22743200-22744600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr10:22743200-22744600	Enhancers	Primary B cells from cord blood	blood
5	chr10:22743400-22744000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr10:22743400-22744600	Enhancers	GM12878-XiMat	blood
7	chr10:22743400-22748400	Weak transcription	HSMMtube	muscle
8	chr10:22743600-22744200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr10:22743600-22744400	Enhancers	Psoas Muscle	Psoas
10	chr10:22743800-22752200	Weak transcription	Brain Hippocampus Middle	brain

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