Variant report

Variant	rs57847001
Chromosome Location	chr10:22712127-22712128
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22710078..22712429-chr10:22713778..22717692,5	K562	blood:
2	chr10:22628810..22631251-chr10:22711739..22714673,3	MCF-7	breast:
3	chr10:22707574..22709419-chr10:22710653..22713066,2	K562	blood:
4	chr10:22697175..22699347-chr10:22710388..22713312,2	K562	blood:
5	chr10:22629324..22631987-chr10:22710131..22713059,2	K562	blood:

Variant related genes	Relation type
ENSG00000272366	Chromatin interaction

rs_ID	r²[population]
rs10828306	0.86[EUR][1000 genomes]
rs11012937	0.86[EUR][1000 genomes]
rs11012952	0.86[EUR][1000 genomes]
rs11012962	0.86[EUR][1000 genomes]
rs11012972	0.81[EUR][1000 genomes]
rs11012977	0.86[EUR][1000 genomes]
rs11012978	0.86[EUR][1000 genomes]
rs11012980	0.86[EUR][1000 genomes]
rs11012989	0.86[EUR][1000 genomes]
rs11552445	0.86[EUR][1000 genomes]
rs11813246	0.81[EUR][1000 genomes]
rs11814745	0.86[EUR][1000 genomes]
rs11817311	0.86[EUR][1000 genomes]
rs11817811	0.81[EUR][1000 genomes]
rs11817873	0.81[EUR][1000 genomes]
rs12241555	0.86[EUR][1000 genomes]
rs12247258	0.81[EUR][1000 genomes]
rs12253249	0.81[EUR][1000 genomes]
rs12261027	0.81[EUR][1000 genomes]
rs12264748	0.86[EUR][1000 genomes]
rs1342317	0.86[EUR][1000 genomes]
rs1539322	0.86[EUR][1000 genomes]
rs16922217	0.86[EUR][1000 genomes]
rs16922235	0.93[EUR][1000 genomes]
rs2066354	0.86[EUR][1000 genomes]
rs2363568	0.81[EUR][1000 genomes]
rs28496146	1.00[EUR][1000 genomes]
rs3004	0.81[EUR][1000 genomes]
rs57283505	0.86[EUR][1000 genomes]
rs57753470	0.86[EUR][1000 genomes]
rs58046964	0.86[EUR][1000 genomes]
rs58340985	0.86[EUR][1000 genomes]
rs58884708	0.82[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs60602527	1.00[EUR][1000 genomes]
rs60837021	1.00[EUR][1000 genomes]
rs6482209	0.81[EUR][1000 genomes]
rs6482213	0.81[EUR][1000 genomes]
rs6482214	0.81[EUR][1000 genomes]
rs6482215	0.81[EUR][1000 genomes]
rs7068522	0.86[EUR][1000 genomes]
rs7069337	0.86[EUR][1000 genomes]
rs7070356	0.86[EUR][1000 genomes]
rs7071015	0.81[EUR][1000 genomes]
rs7072212	0.86[EUR][1000 genomes]
rs7073377	0.81[EUR][1000 genomes]
rs7074430	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7074847	0.86[EUR][1000 genomes]
rs7077927	0.81[EUR][1000 genomes]
rs7078252	0.81[EUR][1000 genomes]
rs7078770	0.86[EUR][1000 genomes]
rs7079531	0.81[EUR][1000 genomes]
rs7086239	0.81[EUR][1000 genomes]
rs7086718	0.86[EUR][1000 genomes]
rs7092483	0.86[EUR][1000 genomes]
rs7094297	0.86[EUR][1000 genomes]
rs7096866	0.86[EUR][1000 genomes]
rs7097932	0.86[EUR][1000 genomes]
rs7099268	0.86[EUR][1000 genomes]
rs7099308	0.86[EUR][1000 genomes]
rs7358106	0.86[EUR][1000 genomes]
rs7358250	0.86[EUR][1000 genomes]
rs73596598	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73596599	1.00[EUR][1000 genomes]
rs73596601	1.00[EUR][1000 genomes]
rs73598505	0.86[EUR][1000 genomes]
rs73598507	0.86[EUR][1000 genomes]
rs73598508	0.86[EUR][1000 genomes]
rs73598512	0.86[EUR][1000 genomes]
rs73598513	0.81[EUR][1000 genomes]
rs7893132	0.86[EUR][1000 genomes]
rs7895113	0.93[EUR][1000 genomes]
rs7895751	0.86[EUR][1000 genomes]
rs7901473	0.81[EUR][1000 genomes]
rs7904538	0.86[EUR][1000 genomes]
rs7904821	0.86[EUR][1000 genomes]
rs7907844	0.86[EUR][1000 genomes]
rs7909597	0.86[EUR][1000 genomes]
rs7914254	0.81[EUR][1000 genomes]
rs7914800	0.86[EUR][1000 genomes]
rs7918271	0.81[EUR][1000 genomes]
rs7919200	0.86[EUR][1000 genomes]
rs7920038	0.86[EUR][1000 genomes]
rs7921358	0.81[EUR][1000 genomes]
rs9663254	0.86[EUR][1000 genomes]
rs9665348	0.86[EUR][1000 genomes]

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22706600-22715800	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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