Variant report

Variant	rs7086239
Chromosome Location	chr10:22703140-22703141
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 74 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:74)

rs_ID	r²[population]
rs10828306	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11012937	0.94[EUR][1000 genomes]
rs11012952	1.00[CEU][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11012962	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11012972	1.00[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11012977	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11012978	1.00[CEU][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11012980	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11012989	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11013010	1.00[CEU][hapmap]
rs11552445	0.94[EUR][1000 genomes]
rs11813246	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11814745	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11817311	1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11817811	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12241555	1.00[CEU][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12247258	1.00[CEU][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12251462	1.00[YRI][hapmap];0.86[AFR][1000 genomes]
rs12253249	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs12261027	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs1342317	1.00[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1539322	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs16922217	1.00[CEU][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs16922235	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs2066354	1.00[CEU][hapmap];0.91[YRI][hapmap];0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2363568	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28496146	0.81[EUR][1000 genomes]
rs3004	1.00[CEU][hapmap]
rs57283505	0.94[EUR][1000 genomes]
rs57753470	0.94[EUR][1000 genomes]
rs57847001	0.81[EUR][1000 genomes]
rs58046964	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs58340985	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs60602527	0.81[EUR][1000 genomes]
rs60837021	0.81[EUR][1000 genomes]
rs6482209	1.00[CEU][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6482212	1.00[CEU][hapmap]
rs6482213	1.00[CEU][hapmap]
rs6482214	1.00[CEU][hapmap]
rs7069337	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7070356	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs7071015	1.00[CEU][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7072212	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7073377	1.00[CEU][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7074430	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs7074847	1.00[CEU][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7077927	1.00[CEU][hapmap];0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7078252	1.00[CEU][hapmap];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7086718	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs7092483	1.00[CEU][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7094297	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7096866	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7099268	1.00[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7099308	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7358106	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7358250	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73596598	0.81[EUR][1000 genomes]
rs73596599	0.81[EUR][1000 genomes]
rs73596601	0.81[EUR][1000 genomes]
rs73598505	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73598507	0.94[EUR][1000 genomes]
rs73598508	0.94[EUR][1000 genomes]
rs73598512	0.81[EUR][1000 genomes]
rs7893132	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs7895751	0.94[EUR][1000 genomes]
rs7901473	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7904538	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7904821	0.81[EUR][1000 genomes]
rs7907844	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7909597	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7918271	1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7919200	0.94[EUR][1000 genomes]
rs7920038	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7921358	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22700400-22706000	Weak transcription	K562	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links