Variant report

Variant	rs73598507
Chromosome Location	chr10:22707250-22707251
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22699045..22701503-chr10:22706844..22708966,2	MCF-7	breast:
2	chr10:22706851..22708578-chr10:22715149..22717665,3	MCF-7	breast:
3	chr10:22705475..22707462-chr10:22724469..22726250,2	MCF-7	breast:
4	chr10:22698472..22701453-chr10:22704172..22708378,3	K562	blood:

Extended variants
information (count: 78 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:78)

rs_ID	r²[population]
rs10828306	1.00[EUR][1000 genomes]
rs11012937	1.00[EUR][1000 genomes]
rs11012952	1.00[EUR][1000 genomes]
rs11012962	1.00[EUR][1000 genomes]
rs11012972	0.94[EUR][1000 genomes]
rs11012977	1.00[EUR][1000 genomes]
rs11012978	1.00[EUR][1000 genomes]
rs11012980	1.00[EUR][1000 genomes]
rs11012989	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11552445	1.00[EUR][1000 genomes]
rs11813246	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11814745	1.00[EUR][1000 genomes]
rs11817311	1.00[EUR][1000 genomes]
rs11817811	0.94[EUR][1000 genomes]
rs11817873	0.81[EUR][1000 genomes]
rs12241555	1.00[EUR][1000 genomes]
rs12247258	0.94[EUR][1000 genomes]
rs12253249	0.94[EUR][1000 genomes]
rs12261027	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1342317	1.00[EUR][1000 genomes]
rs1539322	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs16922217	1.00[EUR][1000 genomes]
rs16922235	0.93[EUR][1000 genomes]
rs2066354	1.00[EUR][1000 genomes]
rs2363568	0.94[EUR][1000 genomes]
rs28496146	0.86[EUR][1000 genomes]
rs3004	0.81[EUR][1000 genomes]
rs57283505	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57753470	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57847001	0.86[EUR][1000 genomes]
rs58046964	1.00[EUR][1000 genomes]
rs58340985	1.00[EUR][1000 genomes]
rs58884708	0.80[EUR][1000 genomes]
rs60602527	0.86[EUR][1000 genomes]
rs60837021	0.86[EUR][1000 genomes]
rs6482209	0.94[EUR][1000 genomes]
rs6482213	0.81[EUR][1000 genomes]
rs6482214	0.81[EUR][1000 genomes]
rs6482215	0.81[EUR][1000 genomes]
rs7069337	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7070356	0.87[EUR][1000 genomes]
rs7071015	0.94[EUR][1000 genomes]
rs7072212	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7073377	0.94[EUR][1000 genomes]
rs7074430	0.86[EUR][1000 genomes]
rs7074847	1.00[EUR][1000 genomes]
rs7077927	0.94[EUR][1000 genomes]
rs7078252	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7079531	0.81[EUR][1000 genomes]
rs7086239	0.94[EUR][1000 genomes]
rs7086718	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7092483	1.00[EUR][1000 genomes]
rs7094297	1.00[EUR][1000 genomes]
rs7096866	1.00[EUR][1000 genomes]
rs7099268	1.00[EUR][1000 genomes]
rs7099308	1.00[EUR][1000 genomes]
rs7358106	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7358250	1.00[EUR][1000 genomes]
rs73596598	0.86[EUR][1000 genomes]
rs73596599	0.86[EUR][1000 genomes]
rs73596601	0.86[EUR][1000 genomes]
rs73598505	1.00[EUR][1000 genomes]
rs73598508	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73598512	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs73598513	0.81[EUR][1000 genomes]
rs7893132	1.00[EUR][1000 genomes]
rs7895113	0.80[EUR][1000 genomes]
rs7895751	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7901473	0.94[EUR][1000 genomes]
rs7904538	1.00[EUR][1000 genomes]
rs7904821	0.87[EUR][1000 genomes]
rs7907844	1.00[EUR][1000 genomes]
rs7909597	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7914254	0.81[EUR][1000 genomes]
rs7918271	0.94[EUR][1000 genomes]
rs7919200	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7920038	1.00[EUR][1000 genomes]
rs7921358	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22706600-22715800	Weak transcription	K562	blood
2	chr10:22706800-22708200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr10:22706800-22708200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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