Variant report

Variant	rs11012980
Chromosome Location	chr10:22682111-22682112
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22625398..22631647-chr10:22676300..22682265,8	K562	blood:
2	chr10:22608333..22611559-chr10:22678806..22682635,4	K562	blood:
3	chr10:22628696..22632444-chr10:22679412..22682265,6	K562	blood:
4	chr10:22611886..22615757-chr10:22677839..22683321,7	K562	blood:

Variant related genes	Relation type
ENSG00000272366	Chromatin interaction
ENSG00000168283	Chromatin interaction

Extended variants
information (count: 87 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:87)

rs_ID	r²[population]
rs10828306	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11012937	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11012952	1.00[CEU][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11012962	1.00[CEU][hapmap];1.00[CHD][hapmap];0.80[MKK][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11012972	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];0.87[LWK][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11012977	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11012978	1.00[CEU][hapmap];0.87[YRI][hapmap];0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11012989	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11012993	1.00[CHD][hapmap]
rs11013010	1.00[CEU][hapmap]
rs11552445	1.00[EUR][1000 genomes]
rs11813246	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11814745	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11817311	1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11817811	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11817873	0.81[EUR][1000 genomes]
rs12241555	1.00[CEU][hapmap];0.95[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12243038	1.00[CHD][hapmap]
rs12247258	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12248190	1.00[CHD][hapmap]
rs12251462	1.00[CHD][hapmap];0.87[LWK][hapmap];0.81[MKK][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs12253249	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs12261027	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes]
rs12265492	1.00[CHD][hapmap]
rs1342317	1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1539322	1.00[CEU][hapmap];1.00[CHD][hapmap];0.85[TSI][hapmap];0.87[EUR][1000 genomes]
rs16922217	1.00[CEU][hapmap];0.95[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16922235	1.00[CEU][hapmap];1.00[CHD][hapmap];0.85[TSI][hapmap];0.93[EUR][1000 genomes]
rs2066354	1.00[CEU][hapmap];0.89[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2363568	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];0.97[LWK][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs28496146	0.86[EUR][1000 genomes]
rs3004	1.00[CEU][hapmap];1.00[CHD][hapmap];0.87[TSI][hapmap];0.81[EUR][1000 genomes]
rs57283505	1.00[EUR][1000 genomes]
rs57753470	1.00[EUR][1000 genomes]
rs57847001	0.86[EUR][1000 genomes]
rs58046964	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58340985	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58884708	0.80[EUR][1000 genomes]
rs60602527	0.86[EUR][1000 genomes]
rs60837021	0.86[EUR][1000 genomes]
rs6482209	1.00[CEU][hapmap];0.95[YRI][hapmap];0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6482210	1.00[CHD][hapmap]
rs6482212	1.00[CEU][hapmap]
rs6482213	1.00[CEU][hapmap];1.00[CHD][hapmap];0.87[TSI][hapmap];0.81[EUR][1000 genomes]
rs6482214	1.00[CEU][hapmap];1.00[CHD][hapmap];0.87[TSI][hapmap];0.81[EUR][1000 genomes]
rs6482215	0.81[EUR][1000 genomes]
rs7069337	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7070356	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs7071015	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7072212	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7073377	1.00[CEU][hapmap];0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7074430	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs7074847	1.00[CEU][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7077927	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7078252	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs7079531	0.81[EUR][1000 genomes]
rs7079548	1.00[CHD][hapmap]
rs7086239	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7086718	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7092483	1.00[CEU][hapmap];0.87[YRI][hapmap];0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7094297	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7096866	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7099268	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[LWK][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7099308	1.00[CEU][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7358106	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7358250	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73596598	0.86[EUR][1000 genomes]
rs73596599	0.86[EUR][1000 genomes]
rs73596601	0.86[EUR][1000 genomes]
rs73598505	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73598507	1.00[EUR][1000 genomes]
rs73598508	1.00[EUR][1000 genomes]
rs73598512	0.87[EUR][1000 genomes]
rs73598513	0.81[EUR][1000 genomes]
rs7893132	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7895113	0.80[EUR][1000 genomes]
rs7895751	1.00[EUR][1000 genomes]
rs7901473	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7904538	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7904821	0.87[EUR][1000 genomes]
rs7907844	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7909597	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7914254	0.81[EUR][1000 genomes]
rs7918271	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7919200	1.00[EUR][1000 genomes]
rs7920038	1.00[CHD][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7921358	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22680800-22682200	Active TSS	Fetal Muscle Leg	muscle
2	chr10:22680800-22683200	Active TSS	K562	blood

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