Variant report

Variant	rs7078770
Chromosome Location	chr10:22747156-22747157
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22745153..22747166-chr10:22836379..22838583,2	MCF-7	breast:

Extended variants
information (count: 76 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:76)

rs_ID	r²[population]
rs10508645	0.89[AFR][1000 genomes]
rs11012952	1.00[CEU][hapmap]
rs11012962	1.00[CEU][hapmap]
rs11012972	1.00[CEU][hapmap]
rs11012978	1.00[CEU][hapmap]
rs11012980	1.00[CEU][hapmap]
rs11012989	1.00[CEU][hapmap]
rs11013006	0.86[AFR][1000 genomes]
rs11013008	0.86[AFR][1000 genomes]
rs11013010	1.00[CEU][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes]
rs11814745	1.00[CEU][hapmap]
rs11817873	0.93[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12241555	1.00[CEU][hapmap]
rs12246511	0.93[EUR][1000 genomes]
rs12247258	1.00[CEU][hapmap]
rs12253249	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs12261027	1.00[CEU][hapmap]
rs12264748	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1342317	1.00[CEU][hapmap]
rs1418377	0.93[EUR][1000 genomes]
rs1539322	1.00[CEU][hapmap];0.85[TSI][hapmap]
rs16922217	1.00[CEU][hapmap]
rs16922235	1.00[CEU][hapmap];0.85[TSI][hapmap];0.80[EUR][1000 genomes]
rs2066354	1.00[CEU][hapmap]
rs2363568	1.00[CEU][hapmap]
rs28496146	0.86[EUR][1000 genomes]
rs3004	1.00[CEU][hapmap];0.87[TSI][hapmap];0.94[EUR][1000 genomes]
rs57847001	0.86[EUR][1000 genomes]
rs58552927	0.93[EUR][1000 genomes]
rs58884708	0.80[EUR][1000 genomes]
rs60317615	0.87[EUR][1000 genomes]
rs60602527	0.86[EUR][1000 genomes]
rs60837021	0.86[EUR][1000 genomes]
rs6482209	1.00[CEU][hapmap]
rs6482212	1.00[CEU][hapmap]
rs6482213	1.00[CEU][hapmap];0.87[TSI][hapmap];0.94[EUR][1000 genomes]
rs6482214	1.00[CEU][hapmap];0.87[TSI][hapmap];0.94[EUR][1000 genomes]
rs6482215	0.94[EUR][1000 genomes]
rs6482217	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7068522	0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7069337	1.00[CEU][hapmap]
rs7070356	1.00[CEU][hapmap]
rs7071015	1.00[CEU][hapmap]
rs7073377	1.00[CEU][hapmap]
rs7074430	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs7074847	1.00[CEU][hapmap]
rs7077927	1.00[CEU][hapmap]
rs7078252	1.00[CEU][hapmap]
rs7079531	0.94[EUR][1000 genomes]
rs7086239	1.00[CEU][hapmap]
rs7086718	1.00[CEU][hapmap]
rs7087672	0.87[EUR][1000 genomes]
rs7089276	0.81[EUR][1000 genomes]
rs7092483	1.00[CEU][hapmap]
rs7097932	1.00[EUR][1000 genomes]
rs7099268	1.00[CEU][hapmap]
rs7099308	1.00[CEU][hapmap]
rs7358106	1.00[CEU][hapmap]
rs73596598	0.86[EUR][1000 genomes]
rs73596599	0.86[EUR][1000 genomes]
rs73596601	0.86[EUR][1000 genomes]
rs73598512	0.87[EUR][1000 genomes]
rs73598513	0.94[EUR][1000 genomes]
rs74123055	0.81[EUR][1000 genomes]
rs7893132	1.00[CEU][hapmap]
rs7895113	0.93[EUR][1000 genomes]
rs7901797	0.93[EUR][1000 genomes]
rs7904006	0.93[EUR][1000 genomes]
rs7904821	0.87[EUR][1000 genomes]
rs7907396	0.93[EUR][1000 genomes]
rs7914254	0.94[EUR][1000 genomes]
rs7914800	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7918271	1.00[CEU][hapmap]
rs9663254	1.00[EUR][1000 genomes]
rs9665348	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9971118	0.81[YRI][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22743400-22748400	Weak transcription	HSMMtube	muscle
2	chr10:22743800-22752200	Weak transcription	Brain Hippocampus Middle	brain
3	chr10:22744000-22752400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr10:22744400-22749000	Weak transcription	K562	blood
5	chr10:22744600-22747600	Weak transcription	GM12878-XiMat	blood
6	chr10:22744800-22747800	Weak transcription	Primary B cells from peripheral blood	blood
7	chr10:22745800-22748800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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