The 2.0 version of rSNPBase

Variant report

Variant rs9701232
Chromosome Location chr1:179936579-179936580
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179924800-179937800 Weak transcription Spleen Spleen
2 chr1:179924800-179938000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:179924800-179938000 Weak transcription Lung lung
4 chr1:179924800-179963600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:179925200-179946200 Weak transcription Stomach Mucosa stomach
6 chr1:179925400-179946000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:179925600-179938400 Weak transcription HSMM muscle
8 chr1:179925800-179937600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:179925800-179937600 Weak transcription Brain Hippocampus Middle brain
10 chr1:179925800-179937600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:179925800-179937800 Weak transcription Thymus Thymus
12 chr1:179925800-179940600 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:179926000-179937800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:179926000-179938000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:179926000-179938000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:179926000-179938000 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:179926000-179938000 Weak transcription Right Atrium heart
18 chr1:179926000-179938200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:179926000-179938400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:179926400-179937800 Weak transcription Brain Angular Gyrus brain
21 chr1:179926800-179961400 Weak transcription A549 lung
22 chr1:179927000-179937800 Weak transcription Primary monocytes fromperipheralblood blood
23 chr1:179927000-179965600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:179927200-179937600 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr1:179927200-179940600 Weak transcription NHDF-Ad bronchial
26 chr1:179928000-179939000 Weak transcription Fetal Heart heart
27 chr1:179928600-179937200 Weak transcription Primary T cells fromperipheralblood blood
28 chr1:179928600-179937200 Weak transcription Left Ventricle heart
29 chr1:179928600-179937800 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:179928800-179937800 Weak transcription Psoas Muscle Psoas
31 chr1:179931400-179936600 Weak transcription Fetal Stomach stomach
32 chr1:179931600-179938000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:179931800-179937600 Weak transcription Ovary ovary
34 chr1:179933800-179937800 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:179934000-179937800 Weak transcription Brain Cingulate Gyrus brain
36 chr1:179934200-179937200 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:179934200-179937600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:179934200-179937600 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr1:179934400-179938000 Weak transcription Adipose Nuclei Adipose
40 chr1:179934600-179937800 Weak transcription Brain Anterior Caudate brain
41 chr1:179934600-179938000 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr1:179934600-179938000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:179934600-179938200 Weak transcription Osteobl bone
44 chr1:179934600-179939200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:179934600-179945000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr1:179934800-179937600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:179935000-179936600 ZNF genes & repeats Primary B cells from cord blood blood
48 chr1:179935000-179936600 ZNF genes & repeats GM12878-XiMat blood
49 chr1:179935000-179938200 Weak transcription Muscle Satellite Cultured Cells --
50 chr1:179935200-179936600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015