Variant report

Variant rs12139323
Chromosome Location chr1:179925104-179925105
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179922600-179925400 Active TSS Colonic Mucosa Colon
2 chr1:179922600-179926000 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr1:179922800-179925200 Active TSS H9 Cell Line embryonic stem cell
4 chr1:179922800-179925200 Active TSS Left Ventricle heart
5 chr1:179922800-179925200 Active TSS Stomach Mucosa stomach
6 chr1:179922800-179925400 Active TSS ES-I3 Cell Line embryonic stem cell
7 chr1:179922800-179925400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:179922800-179925400 Active TSS iPS-15b Cell Line embryonic stem cell
9 chr1:179922800-179925400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:179922800-179925400 Active TSS Pancreatic Islets Pancreatic Islet
11 chr1:179922800-179925400 Active TSS Fetal Muscle Trunk muscle
12 chr1:179922800-179925600 Active TSS H1 Cell Line embryonic stem cell
13 chr1:179922800-179925600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:179922800-179925600 Active TSS Breast Myoepithelial Primary Cells Breast
15 chr1:179922800-179925800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:179922800-179925800 Active TSS HUES48 Cell Line embryonic stem cell
17 chr1:179922800-179925800 Active TSS HUES6 Cell Line embryonic stem cell
18 chr1:179922800-179925800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr1:179922800-179925800 Active TSS Right Ventricle heart
20 chr1:179922800-179926000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:179922800-179926000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:179922800-179926000 Active TSS Psoas Muscle Psoas
23 chr1:179922800-179926800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr1:179922800-179926800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:179922800-179927000 Active TSS Fetal Intestine Large intestine
26 chr1:179923000-179925200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
27 chr1:179923000-179925400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:179923000-179925400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
29 chr1:179923000-179925400 Active TSS Aorta Aorta
30 chr1:179923000-179925800 Active TSS Fetal Muscle Leg muscle
31 chr1:179923000-179926000 Active TSS Ovary ovary
32 chr1:179923200-179925400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:179923200-179925400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:179923200-179925400 Active TSS A549 lung
35 chr1:179923200-179925400 Active TSS HSMMtube muscle
36 chr1:179923200-179925600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:179923200-179925600 Active TSS Fetal Stomach stomach
38 chr1:179923200-179925600 Active TSS Skeletal Muscle Male skeletal muscle
39 chr1:179923200-179925800 Active TSS Brain Anterior Caudate brain
40 chr1:179923200-179925800 Active TSS Brain Inferior Temporal Lobe brain
41 chr1:179923200-179925800 Active TSS Stomach Smooth Muscle stomach
42 chr1:179923200-179925800 Active TSS Thymus Thymus
43 chr1:179923200-179925800 Active TSS NHDF-Ad bronchial
44 chr1:179923200-179926200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:179923200-179926200 Active TSS Muscle Satellite Cultured Cells --
46 chr1:179923200-179926600 Active TSS NHLF lung
47 chr1:179923400-179925200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:179923400-179925200 Active TSS Placenta Placenta
49 chr1:179923400-179925200 Active TSS Rectal Smooth Muscle rectum
50 chr1:179923400-179925400 Active TSS Cortex derived primary cultured neurospheres brain

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