The 2.0 version of rSNPBase

Variant report

Variant rs73032397
Chromosome Location chr1:179984759-179984760
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179939000-179989000 Weak transcription Gastric stomach
2 chr1:179941400-180031800 Weak transcription Spleen Spleen
3 chr1:179946400-179989200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:179947800-179989400 Weak transcription Small Intestine intestine
5 chr1:179955000-179989200 Weak transcription Aorta Aorta
6 chr1:179956800-179989400 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:179958600-179991600 Weak transcription Fetal Brain Male brain
8 chr1:179962000-179989200 Weak transcription Colon Smooth Muscle Colon
9 chr1:179964000-179989200 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:179964000-180014200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:179965800-180013200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:179966600-179988000 Weak transcription Pancreas Pancrea
13 chr1:179966600-179988000 Weak transcription Right Ventricle heart
14 chr1:179970800-180076800 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr1:179971600-179997400 Strong transcription Primary monocytes fromperipheralblood blood
16 chr1:179973000-180010800 Weak transcription Psoas Muscle Psoas
17 chr1:179973400-179988000 Weak transcription Fetal Heart heart
18 chr1:179976000-179989200 Weak transcription Ovary ovary
19 chr1:179976000-179989400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:179976200-180063600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:179977200-179988200 Strong transcription Rectal Mucosa Donor 31 rectum
22 chr1:179978000-179989200 Weak transcription Brain Substantia Nigra brain
23 chr1:179979400-179999600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:179979600-180002000 Strong transcription Fetal Intestine Large intestine
25 chr1:179979800-179989200 Weak transcription Stomach Mucosa stomach
26 chr1:179979800-179998000 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr1:179979800-179998600 Strong transcription Primary T helper cells fromperipheralblood blood
28 chr1:179979800-179999000 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr1:179979800-179999400 Strong transcription Fetal Thymus thymus
30 chr1:179979800-180008400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr1:179980200-180007800 Strong transcription Primary B cells from cord blood blood
32 chr1:179980400-179994000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:179980400-179998200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:179980400-180027400 Strong transcription Dnd41 blood
35 chr1:179980600-179985400 Strong transcription Primary hematopoietic stem cells blood
36 chr1:179980600-179997400 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr1:179980600-179999000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:179980600-179999200 Strong transcription Primary T cells fromperipheralblood blood
39 chr1:179980600-179999800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:179980600-180008000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:179981000-179989000 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr1:179981000-179990200 Strong transcription HSMM muscle
43 chr1:179981000-179995800 Strong transcription Primary neutrophils fromperipheralblood blood
44 chr1:179981000-179997000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr1:179981000-180027200 Strong transcription Primary B cells from peripheral blood blood
46 chr1:179981000-180059000 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr1:179981200-179985600 Strong transcription NHDF-Ad bronchial
48 chr1:179981200-179992000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:179981200-179996400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:179981200-179996800 Strong transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015