The 2.0 version of rSNPBase

Variant report

Variant rs60064848
Chromosome Location chr1:180067218-180067219
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179970800-180076800 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr1:179983600-180083400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:180000800-180083400 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr1:180002400-180085000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:180009000-180069600 Strong transcription Primary monocytes fromperipheralblood blood
6 chr1:180009200-180070000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:180013000-180080000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr1:180029600-180084800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:180030000-180073000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:180040800-180082200 Strong transcription Primary B cells from peripheral blood blood
11 chr1:180042000-180082600 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr1:180043000-180068400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:180044800-180077200 Weak transcription Small Intestine intestine
14 chr1:180048800-180082200 Strong transcription Primary T cells fromperipheralblood blood
15 chr1:180049000-180076800 Strong transcription Primary B cells from cord blood blood
16 chr1:180052800-180082600 Strong transcription Fetal Thymus thymus
17 chr1:180052800-180085800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:180053000-180072400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:180053000-180083000 Strong transcription Liver Liver
20 chr1:180053200-180072600 Strong transcription Fetal Intestine Large intestine
21 chr1:180053600-180068000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr1:180054000-180068200 Strong transcription Primary T helper naive cells fromperipheralblood blood
23 chr1:180054000-180082600 Strong transcription Dnd41 blood
24 chr1:180054400-180072800 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr1:180054600-180079400 Weak transcription Fetal Brain Male brain
26 chr1:180056800-180068600 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr1:180057000-180068600 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr1:180057200-180068400 Strong transcription Primary T cells from cord blood blood
29 chr1:180057400-180068400 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr1:180057600-180082600 Strong transcription Primary T helper cells PMA-I stimulated --
31 chr1:180057600-180082800 Strong transcription Adipose Nuclei Adipose
32 chr1:180058000-180069400 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr1:180058000-180070000 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr1:180059000-180072600 Strong transcription Duodenum Mucosa Duodenum
35 chr1:180059200-180069000 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr1:180059200-180073000 Strong transcription Fetal Muscle Trunk muscle
37 chr1:180059200-180076000 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr1:180059600-180069600 Strong transcription HUES64 Cell Line embryonic stem cell
39 chr1:180059600-180073600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr1:180060000-180072800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:180060200-180067800 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr1:180060200-180068200 Strong transcription Cortex derived primary cultured neurospheres brain
43 chr1:180060200-180068400 Strong transcription Brain Hippocampus Middle brain
44 chr1:180060200-180072600 Strong transcription iPS-18 Cell Line embryonic stem cell
45 chr1:180060400-180067400 Strong transcription NHDF-Ad bronchial
46 chr1:180060800-180068800 Strong transcription Primary hematopoietic stem cells blood
47 chr1:180061000-180069800 Strong transcription Primary T killer naive cells fromperipheralblood blood
48 chr1:180061000-180070600 Weak transcription Gastric stomach
49 chr1:180061000-180071200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:180061200-180070600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015