Variant report

Variant	rs9764312
Chromosome Location	chr5:92503941-92503942
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10428629	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10514371	0.89[EUR][1000 genomes]
rs11950344	0.87[AMR][1000 genomes]
rs11950401	0.82[AMR][1000 genomes]
rs11951631	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11956024	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11960764	0.89[EUR][1000 genomes]
rs17082959	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17083014	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17083016	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4072110	0.82[AMR][1000 genomes]
rs4526087	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs59636184	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs61453097	0.81[EUR][1000 genomes]
rs6557062	0.81[EUR][1000 genomes]
rs6557065	0.89[EUR][1000 genomes]
rs6872680	0.89[EUR][1000 genomes]
rs6884717	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72784407	0.89[EUR][1000 genomes]
rs72784408	0.89[EUR][1000 genomes]
rs72784412	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72784413	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72784415	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72784417	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72784426	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72784435	0.83[EUR][1000 genomes]
rs72784436	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72784437	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72784438	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72784445	0.87[AMR][1000 genomes]
rs7341012	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7341013	0.82[EUR][1000 genomes]
rs7701217	0.81[EUR][1000 genomes]
rs7722832	0.89[EUR][1000 genomes]
rs7725232	0.87[AMR][1000 genomes]
rs7729235	0.89[EUR][1000 genomes]
rs7733100	0.88[EUR][1000 genomes]
rs7737511	0.80[EUR][1000 genomes]
rs7738036	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029175	chr5:92436038-92548473	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:92500800-92521600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links