The 2.0 version of rSNPBase

Variant report

Variant rs978109
Chromosome Location chr3:156389075-156389076
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:156382600-156391600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr3:156383000-156391400 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr3:156383600-156390600 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr3:156384200-156391400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr3:156384200-156391400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr3:156385600-156390600 Enhancers Primary monocytes fromperipheralblood blood
7 chr3:156386200-156391600 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr3:156386400-156390800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr3:156386400-156391200 Weak transcription Primary B cells from peripheral blood blood
10 chr3:156386400-156391200 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr3:156386400-156391200 Weak transcription NHEK skin
12 chr3:156386400-156391400 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr3:156386400-156391400 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr3:156386400-156391400 Weak transcription Brain Cingulate Gyrus brain
15 chr3:156386400-156391400 Weak transcription Fetal Intestine Small intestine
16 chr3:156386400-156391600 Weak transcription Primary T cells fromperipheralblood blood
17 chr3:156386400-156391600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr3:156386400-156391600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr3:156386600-156389200 Enhancers Monocytes-CD14+_RO01746 blood
20 chr3:156386600-156390600 Weak transcription HepG2 liver
21 chr3:156386600-156391200 Weak transcription Liver Liver
22 chr3:156386600-156391400 Weak transcription Primary T cells from cord blood blood
23 chr3:156386600-156391400 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr3:156386600-156391400 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr3:156386600-156391400 Weak transcription A549 lung
26 chr3:156386600-156391400 Weak transcription HMEC breast
27 chr3:156386600-156391600 Weak transcription Fetal Lung lung
28 chr3:156386800-156391200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr3:156386800-156391200 Weak transcription GM12878-XiMat blood
30 chr3:156386800-156391200 Weak transcription K562 blood
31 chr3:156386800-156391600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:156386800-156391600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr3:156386800-156391600 Weak transcription Fetal Intestine Large intestine
34 chr3:156386800-156391600 Weak transcription NHLF lung
35 chr3:156387000-156391000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr3:156387000-156391200 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr3:156387000-156391200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr3:156387000-156391200 Weak transcription Hela-S3 cervix
39 chr3:156387000-156391400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr3:156387000-156391400 Weak transcription Muscle Satellite Cultured Cells --
41 chr3:156387000-156391400 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr3:156387000-156391600 Weak transcription NHDF-Ad bronchial
43 chr3:156387400-156391200 Weak transcription Small Intestine intestine
44 chr3:156387400-156391400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:156388000-156389600 Enhancers Primary neutrophils fromperipheralblood blood
46 chr3:156388200-156391400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr3:156388200-156391600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr3:156388200-156391600 Weak transcription Stomach Mucosa stomach
49 chr3:156388600-156390800 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr3:156388600-156391400 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015