Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:87713968..87715831-chr8:90615267..90617535,2	K562	blood:

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10094222	0.87[JPT][hapmap]
rs1009574	0.83[JPT][hapmap]
rs1031649	0.89[CEU][hapmap];0.95[JPT][hapmap]
rs1219096	0.95[JPT][hapmap]
rs12675140	0.89[CEU][hapmap];0.95[JPT][hapmap]
rs13252425	0.89[CEU][hapmap];0.95[JPT][hapmap]
rs13268738	0.81[JPT][hapmap]
rs13278423	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1372170	0.89[CEU][hapmap];0.95[JPT][hapmap]
rs1379742	0.95[JPT][hapmap]
rs1441238	0.95[JPT][hapmap]
rs1441243	0.82[JPT][hapmap]
rs1458134	0.89[CEU][hapmap];0.95[JPT][hapmap]
rs1545221	0.89[CEU][hapmap];0.95[JPT][hapmap]
rs1596027	0.95[JPT][hapmap]
rs16916907	0.92[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1837743	0.93[CEU][hapmap];0.92[CHB][hapmap];0.83[JPT][hapmap]
rs2013536	0.82[JPT][hapmap]
rs2957792	0.86[JPT][hapmap]
rs315964	0.95[JPT][hapmap]
rs315973	0.87[JPT][hapmap]
rs315976	0.95[JPT][hapmap]
rs315977	0.95[JPT][hapmap]
rs3735967	0.83[JPT][hapmap]
rs3779790	0.82[JPT][hapmap]
rs4961211	0.95[JPT][hapmap]
rs7002468	0.82[JPT][hapmap]
rs7002965	0.89[CEU][hapmap];0.95[JPT][hapmap]
rs7014125	0.95[JPT][hapmap]
rs7814749	0.95[JPT][hapmap]
rs7842410	0.87[JPT][hapmap]
rs971146	0.89[CEU][hapmap];0.95[JPT][hapmap]
rs996077	0.95[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023510	chr8:87429001-87874948	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv891151	chr8:87690019-87776019	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1026794	chr8:87698639-87957840	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv539662	chr8:87698639-87957840	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:87713800-87715600	Weak transcription	Fetal Brain Male	brain

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