Variant report

Variant	rs9791369
Chromosome Location	chr6:75340527-75340528
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10498899	0.89[ASN][1000 genomes]
rs1336763	0.81[ASN][1000 genomes]
rs16885111	0.82[ASN][1000 genomes]
rs16885127	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16885136	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16885150	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16885156	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16885219	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs16885245	0.89[ASN][1000 genomes]
rs16885249	0.89[ASN][1000 genomes]
rs16885255	0.89[ASN][1000 genomes]
rs16885278	0.89[ASN][1000 genomes]
rs16885284	0.84[ASN][1000 genomes]
rs16885290	0.84[ASN][1000 genomes]
rs16885295	0.84[ASN][1000 genomes]
rs58081408	0.89[ASN][1000 genomes]
rs59720369	0.89[ASN][1000 genomes]
rs61335781	0.89[ASN][1000 genomes]
rs6904990	0.89[ASN][1000 genomes]
rs6906569	0.89[ASN][1000 genomes]
rs6918256	0.89[ASN][1000 genomes]
rs6940669	0.89[ASN][1000 genomes]
rs73459828	0.89[ASN][1000 genomes]
rs73459831	0.89[ASN][1000 genomes]
rs73459834	0.89[ASN][1000 genomes]
rs73459836	0.89[ASN][1000 genomes]
rs73459843	0.89[ASN][1000 genomes]
rs73459849	0.89[ASN][1000 genomes]
rs73459850	0.89[ASN][1000 genomes]
rs73459852	0.89[ASN][1000 genomes]
rs73459857	0.87[ASN][1000 genomes]
rs73459859	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv520746	chr6:75211546-75691814	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv917283	chr6:75234428-75641440	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv830694	chr6:75245483-75446282	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75340200-75342400	Enhancers	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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