Variant report
Variant | rs9817716 |
---|---|
Chromosome Location | chr3:146358445-146358446 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:5)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:5 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:146312409..146312943-chr3:146358371..146359105,2 | MCF-7 | breast: | |
2 | chr3:146353700..146355636-chr3:146357021..146358712,2 | MCF-7 | breast: | |
3 | chr3:145938152..145938842-chr3:146358330..146358865,2 | MCF-7 | breast: | |
4 | chr3:146307488..146308559-chr3:146358352..146359232,4 | MCF-7 | breast: | |
5 | chr3:146306307..146308486-chr3:146358301..146359398,16 | MCF-7 | breast: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000241457 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10048923 | 0.89[EUR][1000 genomes] |
rs10049152 | 0.81[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs10049391 | 0.89[EUR][1000 genomes] |
rs10212287 | 0.82[EUR][1000 genomes] |
rs13315271 | 0.89[EUR][1000 genomes] |
rs13319452 | 0.82[EUR][1000 genomes] |
rs13327766 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13434283 | 0.81[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs28399898 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9289724 | 0.82[EUR][1000 genomes] |
rs9813883 | 0.82[EUR][1000 genomes] |
rs9813974 | 0.82[EUR][1000 genomes] |
rs9818634 | 0.89[EUR][1000 genomes] |
rs9823549 | 0.82[EUR][1000 genomes] |
rs9824610 | 0.82[EUR][1000 genomes] |
rs9838895 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9847573 | 0.89[EUR][1000 genomes] |
rs9859604 | 0.81[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs9861148 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9862550 | 0.89[EUR][1000 genomes] |
rs9862582 | 0.81[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs9867955 | 0.86[EUR][1000 genomes] |
rs9878368 | 0.82[EUR][1000 genomes] |
rs9879033 | 0.82[EUR][1000 genomes] |
rs9881924 | 0.81[AMR][1000 genomes];1.00[EUR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:146357600-146361400 | Enhancers | Dnd41 | blood |