Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1356925	0.80[EUR][1000 genomes]
rs16830484	0.80[EUR][1000 genomes]
rs16830510	0.83[EUR][1000 genomes]
rs16830633	1.00[CEU][hapmap]
rs1962890	0.81[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs1980254	0.80[EUR][1000 genomes]
rs28434644	0.82[EUR][1000 genomes]
rs59412427	0.80[EUR][1000 genomes]
rs61036525	0.80[EUR][1000 genomes]
rs6768439	0.86[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6769217	0.80[EUR][1000 genomes]
rs6796636	0.80[EUR][1000 genomes]
rs7619259	0.80[EUR][1000 genomes]
rs7620654	1.00[CEU][hapmap]
rs7629269	0.80[EUR][1000 genomes]
rs7638815	1.00[CEU][hapmap]
rs7653224	0.80[EUR][1000 genomes]
rs9817830	0.80[EUR][1000 genomes]
rs9818110	0.80[EUR][1000 genomes]
rs9821936	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9823562	0.80[EUR][1000 genomes]
rs9825694	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs9826416	1.00[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9829229	0.80[EUR][1000 genomes]
rs9831125	1.00[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9832443	0.80[EUR][1000 genomes]
rs9840484	0.80[EUR][1000 genomes]
rs9852770	0.80[EUR][1000 genomes]
rs9860690	0.80[EUR][1000 genomes]
rs9863199	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9864641	0.80[EUR][1000 genomes]
rs9866095	0.80[EUR][1000 genomes]
rs9881499	0.80[EUR][1000 genomes]
rs9882993	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998949	chr3:158774806-159394550	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159380200-159386800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr3:159383200-159387200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr3:159383600-159385200	Weak transcription	Left Ventricle	heart
4	chr3:159383800-159395000	Weak transcription	Right Atrium	heart
5	chr3:159384600-159385400	Enhancers	Right Ventricle	heart
6	chr3:159384600-159385400	Enhancers	HMEC	breast
7	chr3:159384800-159387600	Enhancers	Fetal Heart	heart

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