Variant report

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs13064047	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13067187	0.88[EUR][1000 genomes]
rs1574901	0.92[EUR][1000 genomes]
rs1587428	0.82[EUR][1000 genomes]
rs1587429	0.86[EUR][1000 genomes]
rs1587430	0.86[EUR][1000 genomes]
rs1604007	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17015670	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2036270	0.86[EUR][1000 genomes]
rs2062487	0.86[EUR][1000 genomes]
rs4444672	0.86[EUR][1000 genomes]
rs4484159	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4858698	0.86[EUR][1000 genomes]
rs4858702	0.86[EUR][1000 genomes]
rs4858703	0.86[EUR][1000 genomes]
rs6419850	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6550939	0.96[ASN][1000 genomes]
rs6550943	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6550945	0.86[EUR][1000 genomes]
rs6550948	0.83[EUR][1000 genomes]
rs6766372	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6775433	0.91[EUR][1000 genomes]
rs6777624	0.89[EUR][1000 genomes]
rs6777955	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6786779	0.96[ASN][1000 genomes]
rs7430038	0.86[EUR][1000 genomes]
rs9310769	0.96[ASN][1000 genomes]
rs9310770	0.86[EUR][1000 genomes]
rs9809401	0.88[EUR][1000 genomes]
rs9809916	0.85[EUR][1000 genomes]
rs9820531	0.96[ASN][1000 genomes]
rs9831718	0.86[EUR][1000 genomes]
rs9866836	0.88[EUR][1000 genomes]
rs9882518	0.86[EUR][1000 genomes]
rs994267	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834644	chr3:24936987-25112610	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv589955	chr3:24987823-25113358	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25099800-25111200	Weak transcription	Fetal Lung	lung
2	chr3:25101200-25102400	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr3:25101200-25102600	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr3:25101400-25101800	Weak transcription	HUES6 Cell Line	embryonic stem cell

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