Variant report
| Variant | rs9966539 |
|---|---|
| Chromosome Location | chr18:43991142-43991143 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:43973600-43991400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr18:43981800-43991800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr18:43983200-43991200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 4 | chr18:43985000-43995200 | Enhancers | Fetal Heart | heart |
| 5 | chr18:43985200-43997000 | Enhancers | Fetal Muscle Leg | muscle |
| 6 | chr18:43985200-43997400 | Enhancers | Left Ventricle | heart |
| 7 | chr18:43985200-43997800 | Enhancers | Right Ventricle | heart |
| 8 | chr18:43985200-44000600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 9 | chr18:43985800-43991800 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 10 | chr18:43986800-43991800 | Weak transcription | Brain Angular Gyrus | brain |
| 11 | chr18:43987400-43991800 | Weak transcription | Ovary | ovary |
| 12 | chr18:43987800-43992000 | Enhancers | Stomach Smooth Muscle | stomach |
| 13 | chr18:43988200-43991200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 14 | chr18:43988400-43992400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr18:43988600-43991600 | Weak transcription | Placenta | Placenta |
| 16 | chr18:43988600-43992000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 17 | chr18:43988600-43992200 | Weak transcription | Aorta | Aorta |
| 18 | chr18:43988800-43996400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 19 | chr18:43989400-43994600 | Weak transcription | K562 | blood |
| 20 | chr18:43989400-43994800 | Enhancers | Fetal Muscle Trunk | muscle |
| 21 | chr18:43989600-43993400 | Enhancers | Right Atrium | heart |
| 22 | chr18:43989800-43991200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 23 | chr18:43989800-43992200 | Weak transcription | Fetal Brain Female | brain |
| 24 | chr18:43989800-43999000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 25 | chr18:43990000-43991800 | Enhancers | Psoas Muscle | Psoas |
| 26 | chr18:43990200-43992000 | Enhancers | Colon Smooth Muscle | Colon |
| 27 | chr18:43990200-43993800 | Enhancers | Lung | lung |
| 28 | chr18:43990200-43994000 | Enhancers | Spleen | Spleen |
| 29 | chr18:43990200-43995200 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 30 | chr18:43990400-43991200 | Weak transcription | Fetal Thymus | thymus |
| 31 | chr18:43990400-43992000 | Weak transcription | Colonic Mucosa | Colon |
| 32 | chr18:43990400-43992800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 33 | chr18:43990600-43991600 | Weak transcription | Fetal Brain Male | brain |
| 34 | chr18:43990800-43991800 | Weak transcription | Brain Germinal Matrix | brain |
| 35 | chr18:43990800-43992600 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 36 | chr18:43990800-43994200 | Enhancers | Fetal Stomach | stomach |
| 37 | chr18:43990800-43995200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 38 | chr18:43990800-43996000 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 39 | chr18:43991000-43991200 | Bivalent Enhancer | HSMMtube | muscle |
| 40 | chr18:43991000-43991400 | Weak transcription | Brain Anterior Caudate | brain |
| 41 | chr18:43991000-43991800 | Enhancers | Rectal Smooth Muscle | rectum |
| 42 | chr18:43991000-43994400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 43 | chr18:43991000-43994400 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 44 | chr18:43991000-43994400 | Enhancers | Fetal Lung | lung |
| 45 | chr18:43991000-43994800 | Enhancers | Esophagus | oesophagus |
| 46 | chr18:43991000-43995000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 47 | chr18:43991000-43996800 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 48 | chr18:43991000-43997000 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
