Variant report

Variant	rs10135545
Chromosome Location	chr14:32826987-32826988
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:32783285..32786255-chr14:32826515..32829256,2	MCF-7	breast:

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:62)

rs_ID	r²[population]
rs10129967	0.94[ASN][1000 genomes]
rs10131297	0.85[AMR][1000 genomes]
rs10136452	0.92[ASN][1000 genomes]
rs10139496	0.91[ASN][1000 genomes]
rs10139567	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10140077	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10140526	0.92[ASN][1000 genomes]
rs10143009	0.94[ASN][1000 genomes]
rs10143442	0.91[ASN][1000 genomes]
rs10145127	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10145282	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10150574	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10150657	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10150670	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10151233	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10220343	0.91[ASN][1000 genomes]
rs10431651	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11849373	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11849501	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11849651	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12050081	0.94[ASN][1000 genomes]
rs12717220	0.92[ASN][1000 genomes]
rs12879177	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12883558	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12885011	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12889258	0.92[ASN][1000 genomes]
rs12896756	0.92[ASN][1000 genomes]
rs12897283	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17098722	0.87[EUR][1000 genomes]
rs17098769	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17098849	0.92[ASN][1000 genomes]
rs17098889	0.94[ASN][1000 genomes]
rs1998429	0.92[ASN][1000 genomes]
rs28451992	0.94[ASN][1000 genomes]
rs28563822	0.94[ASN][1000 genomes]
rs28599717	0.94[ASN][1000 genomes]
rs34247479	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35403923	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58625904	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6571510	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs66517744	0.94[ASN][1000 genomes]
rs67938997	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7146034	0.83[ASN][1000 genomes]
rs7146346	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7146562	0.92[ASN][1000 genomes]
rs7147028	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7147285	0.92[ASN][1000 genomes]
rs7148036	0.92[ASN][1000 genomes]
rs7148808	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7151016	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7151681	0.92[ASN][1000 genomes]
rs7153398	0.92[ASN][1000 genomes]
rs8006624	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs8017400	0.94[ASN][1000 genomes]
rs8019207	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8020196	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8020197	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9322889	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322890	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9322893	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9322894	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9322899	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32797200-32831600	Weak transcription	Right Atrium	heart
2	chr14:32814000-32827800	Weak transcription	Brain Germinal Matrix	brain
3	chr14:32815000-32827000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr14:32819200-32834200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr14:32822400-32834400	Weak transcription	Fetal Brain Female	brain
6	chr14:32823600-32828400	Enhancers	Brain Substantia Nigra	brain
7	chr14:32825600-32828200	Enhancers	Brain Cingulate Gyrus	brain
8	chr14:32826000-32828400	Enhancers	Brain Anterior Caudate	brain
9	chr14:32826000-32829000	Enhancers	Brain Hippocampus Middle	brain
10	chr14:32826600-32828200	Enhancers	Brain Angular Gyrus	brain
11	chr14:32826600-32828200	Enhancers	Brain Inferior Temporal Lobe	brain

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