Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:117810000..117816028-chr7:117818998..117827280,18	MCF-7	breast:
2	chr7:117780666..117783113-chr7:117815152..117816671,2	K562	blood:

Variant related genes	Relation type
ENSG00000128534	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10231048	1.00[AMR][1000 genomes]
rs10237829	1.00[AMR][1000 genomes]
rs10258355	1.00[AMR][1000 genomes]
rs10265880	1.00[AMR][1000 genomes]
rs10269886	0.85[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10274083	1.00[AMR][1000 genomes]
rs10275073	1.00[AMR][1000 genomes]
rs10276584	1.00[AMR][1000 genomes]
rs10480726	1.00[AMR][1000 genomes]
rs1055882	1.00[AMR][1000 genomes]
rs12333891	1.00[AMR][1000 genomes]
rs12531917	1.00[AMR][1000 genomes]
rs12535557	1.00[AMR][1000 genomes]
rs28437222	1.00[AMR][1000 genomes]
rs28704799	1.00[AMR][1000 genomes]
rs35949266	1.00[AMR][1000 genomes]
rs73716917	1.00[AMR][1000 genomes]
rs73716918	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73716925	1.00[AMR][1000 genomes]
rs73718534	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869971	chr7:117420583-118274149	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
2	nsv889088	chr7:117744660-117913648	Weak transcription Active TSS Strong transcription Flanking Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117791200-117815800	Weak transcription	Psoas Muscle	Psoas
2	chr7:117813200-117815800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr7:117815400-117816200	Enhancers	Fetal Heart	heart
4	chr7:117815400-117816400	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr7:117815600-117816000	Enhancers	NHEK	skin

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