Variant report

Variant	rs10226208
Chromosome Location	chr7:137402460-137402461
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:137400906..137403879-chr7:137418023..137420463,3	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10224447	1.00[EUR][1000 genomes]
rs10243295	1.00[EUR][1000 genomes]
rs10250856	1.00[EUR][1000 genomes]
rs10260158	1.00[EUR][1000 genomes]
rs10262997	1.00[EUR][1000 genomes]
rs10263154	1.00[EUR][1000 genomes]
rs10267187	1.00[EUR][1000 genomes]
rs10268052	1.00[EUR][1000 genomes]
rs10271504	1.00[EUR][1000 genomes]
rs10274267	1.00[EUR][1000 genomes]
rs10279889	1.00[EUR][1000 genomes]
rs10281950	1.00[EUR][1000 genomes]
rs28398841	1.00[EUR][1000 genomes]
rs28892326	1.00[EUR][1000 genomes]
rs35323708	1.00[EUR][1000 genomes]
rs57866951	1.00[EUR][1000 genomes]
rs57960588	1.00[EUR][1000 genomes]
rs58042762	1.00[EUR][1000 genomes]
rs6467716	1.00[EUR][1000 genomes]
rs73462637	1.00[EUR][1000 genomes]
rs73462639	1.00[EUR][1000 genomes]
rs73462653	1.00[EUR][1000 genomes]
rs73462656	1.00[EUR][1000 genomes]
rs73728804	1.00[EUR][1000 genomes]
rs73730087	1.00[EUR][1000 genomes]
rs73730089	1.00[EUR][1000 genomes]
rs73730093	1.00[EUR][1000 genomes]
rs73730096	1.00[EUR][1000 genomes]
rs7780632	1.00[EUR][1000 genomes]
rs7787968	1.00[EUR][1000 genomes]
rs7793252	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv464731	chr7:137356651-137404781	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
3	nsv608466	chr7:137356651-137404781	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137399200-137403200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr7:137399400-137403600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:137399600-137402600	Enhancers	Muscle Satellite Cultured Cells	--
4	chr7:137399800-137403200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr7:137400200-137402600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr7:137400400-137402800	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr7:137400600-137403800	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr7:137400600-137404000	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr7:137400800-137402600	Weak transcription	NHDF-Ad	bronchial
10	chr7:137400800-137403200	Weak transcription	Brain Anterior Caudate	brain
11	chr7:137400800-137403400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr7:137400800-137404800	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr7:137400800-137405400	Weak transcription	Right Atrium	heart
14	chr7:137401000-137402600	Weak transcription	HSMM	muscle
15	chr7:137401000-137402800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr7:137401000-137403000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr7:137401600-137402600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr7:137401600-137402600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr7:137401600-137404000	Enhancers	ES-I3 Cell Line	embryonic stem cell
20	chr7:137401800-137402600	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr7:137401800-137402800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr7:137401800-137403600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
23	chr7:137401800-137404000	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr7:137401800-137404400	Enhancers	iPS-18 Cell Line	embryonic stem cell
25	chr7:137402000-137402600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr7:137402200-137403600	Enhancers	H1 Cell Line	embryonic stem cell
27	chr7:137402400-137402600	Enhancers	HMEC	breast
28	chr7:137402400-137402600	Enhancers	NH-A	brain
29	chr7:137402400-137402800	Enhancers	H9 Cell Line	embryonic stem cell
30	chr7:137402400-137403000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr7:137402400-137403200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr7:137402400-137403200	Enhancers	HSMMtube	muscle
33	chr7:137402400-137403200	Flanking Active TSS	Osteobl	bone
34	chr7:137402400-137403400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr7:137402400-137403600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr7:137402400-137403600	Enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr7:137402400-137403600	Enhancers	Primary monocytes fromperipheralblood	blood

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