Variant report

No data

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:117065049-117068137..7:117341506-117356953	H1-hESC	embryonic stem cell:	embryo
2	7:116651084-116657331..7:117341506-117356953	Hela-S3	cervix:
3	7:117251668-117255413..7:117341506-117356953	Hela-S3	cervix:
4	7:116754962-116765597..7:117341506-117356953	Hela-S3	cervix:
5	7:116728195-116740907..7:117341506-117356953	Hela-S3	cervix:
6	7:116434729-116454408..7:117341506-117356953	Hela-S3	cervix:
7	7:117114628-117119361..7:117341506-117356953	H1-hESC	embryonic stem cell:	embryo
8	7:117100350-117112126..7:117341506-117356953	GM12878	blood:
9	7:115847372-115857098..7:117341506-117356953	Hela-S3	cervix:
10	7:115890993-115892266..7:117341506-117356953	H1-hESC	embryonic stem cell:	embryo
11	7:116307511-116321259..7:117341506-117356953	Hela-S3	cervix:
12	7:116604327-116608063..7:117341506-117356953	H1-hESC	embryonic stem cell:	embryo
13	7:115861595-115870968..7:117341506-117356953	Hela-S3	cervix:

No data

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1208524	0.88[ASN][1000 genomes]
rs1208525	0.88[ASN][1000 genomes]
rs1208526	0.89[ASN][1000 genomes]
rs1208528	0.89[ASN][1000 genomes]
rs12672572	0.91[ASN][1000 genomes]
rs13237279	0.86[ASN][1000 genomes]
rs177284	0.81[ASN][1000 genomes]
rs1896885	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs214152	0.85[ASN][1000 genomes]
rs214160	0.81[ASN][1000 genomes]
rs2283058	0.83[ASN][1000 genomes]
rs2402229	0.89[ASN][1000 genomes]
rs34257228	0.95[ASN][1000 genomes]
rs34445757	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3735645	0.82[ASN][1000 genomes]
rs4148724	0.86[ASN][1000 genomes]
rs4373465	0.95[ASN][1000 genomes]
rs6466619	0.81[ASN][1000 genomes]
rs6970681	0.93[ASN][1000 genomes]
rs6975912	0.86[ASN][1000 genomes]
rs6978581	0.92[ASN][1000 genomes]
rs7777807	0.94[ASN][1000 genomes]
rs7793030	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs975722	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv464695	chr7:117342771-117393516	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv608258	chr7:117342771-117393516	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117327000-117376400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr7:117344400-117350000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr7:117344400-117364400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr7:117346600-117373400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr7:117347000-117358000	Weak transcription	Fetal Brain Male	brain
6	chr7:117347600-117350000	Weak transcription	Hela-S3	cervix
7	chr7:117347600-117356800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr7:117347600-117366600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr7:117347800-117351000	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr7:117347800-117363000	Weak transcription	Fetal Heart	heart
11	chr7:117348400-117357000	Weak transcription	Fetal Lung	lung
12	chr7:117348600-117354200	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr7:117348800-117351000	Weak transcription	HUES64 Cell Line	embryonic stem cell
14	chr7:117348800-117351800	Enhancers	Dnd41	blood
15	chr7:117349000-117359000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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