Variant report

Variant	rs10517847
Chromosome Location	chr4:166356430-166356431
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:166356349..166358092-chr4:166359657..166361158,2	MCF-7	breast:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs17489060	1.00[AFR][1000 genomes]
rs17489067	1.00[AFR][1000 genomes]
rs17585655	1.00[AFR][1000 genomes]
rs17686888	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17686918	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17687037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17687250	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17687429	0.82[EUR][1000 genomes]
rs2053276	0.81[AMR][1000 genomes]
rs3775313	0.82[EUR][1000 genomes]
rs4690818	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4691194	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4691198	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66980054	0.82[ASN][1000 genomes]
rs72701627	1.00[AFR][1000 genomes]
rs72701632	1.00[AFR][1000 genomes]
rs72701634	1.00[AFR][1000 genomes]
rs72701636	1.00[AFR][1000 genomes]
rs72701637	1.00[AFR][1000 genomes]
rs72701639	1.00[AFR][1000 genomes]
rs72701642	1.00[AFR][1000 genomes]
rs72701645	1.00[AFR][1000 genomes]
rs72701652	1.00[AFR][1000 genomes]
rs72701657	1.00[AFR][1000 genomes]
rs72701659	1.00[AFR][1000 genomes]
rs72701664	1.00[AFR][1000 genomes]
rs72701670	1.00[AFR][1000 genomes]
rs72701672	1.00[AFR][1000 genomes]
rs72701673	1.00[AFR][1000 genomes]
rs72701675	1.00[AFR][1000 genomes]
rs72701694	0.91[ASN][1000 genomes]
rs72703611	0.89[ASN][1000 genomes]
rs72703619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72703624	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72703639	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72703653	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72703657	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72703674	0.82[EUR][1000 genomes]
rs72703686	0.82[EUR][1000 genomes]
rs7656675	1.00[AFR][1000 genomes]
rs7657847	1.00[AFR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166319600-166361800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr4:166326800-166364400	Weak transcription	Brain Germinal Matrix	brain
3	chr4:166340000-166358800	Weak transcription	Fetal Brain Female	brain
4	chr4:166342800-166360000	Weak transcription	Brain Hippocampus Middle	brain
5	chr4:166342800-166364000	Weak transcription	HepG2	liver
6	chr4:166343000-166358200	Weak transcription	Brain Cingulate Gyrus	brain
7	chr4:166347400-166360800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr4:166348400-166361800	Weak transcription	Aorta	Aorta
9	chr4:166350400-166359400	Weak transcription	Brain Anterior Caudate	brain
10	chr4:166351000-166359400	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr4:166352600-166361000	Weak transcription	Brain Angular Gyrus	brain
12	chr4:166352600-166366400	Weak transcription	Pancreas	Pancrea
13	chr4:166353200-166359200	Weak transcription	Fetal Brain Male	brain
14	chr4:166353400-166360800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr4:166355800-166360600	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr4:166356400-166360800	Weak transcription	HUES48 Cell Line	embryonic stem cell

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