Variant report

Variant	rs4691194
Chromosome Location	chr4:166362584-166362585
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:166361690..166363243-chr4:166374413..166376065,2	MCF-7	breast:
2	chr4:166341842..166344662-chr4:166361837..166363651,2	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10517847	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11737095	0.85[TSI][hapmap]
rs17489060	1.00[AFR][1000 genomes]
rs17489067	1.00[AFR][1000 genomes]
rs17585655	1.00[AFR][1000 genomes]
rs17686888	1.00[ASW][hapmap];1.00[CEU][hapmap];0.83[GIH][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17686918	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17687037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17687250	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17687429	1.00[MEX][hapmap];0.85[TSI][hapmap];0.82[EUR][1000 genomes]
rs2053276	1.00[CEU][hapmap];0.81[AMR][1000 genomes]
rs2276931	1.00[MEX][hapmap]
rs2304592	0.85[TSI][hapmap]
rs3775313	1.00[MEX][hapmap];0.85[TSI][hapmap];0.82[EUR][1000 genomes]
rs4690818	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4690821	1.00[MEX][hapmap];0.85[TSI][hapmap]
rs4691198	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66980054	0.82[ASN][1000 genomes]
rs72701627	1.00[AFR][1000 genomes]
rs72701632	1.00[AFR][1000 genomes]
rs72701634	1.00[AFR][1000 genomes]
rs72701636	1.00[AFR][1000 genomes]
rs72701637	1.00[AFR][1000 genomes]
rs72701639	1.00[AFR][1000 genomes]
rs72701642	1.00[AFR][1000 genomes]
rs72701645	1.00[AFR][1000 genomes]
rs72701652	1.00[AFR][1000 genomes]
rs72701657	1.00[AFR][1000 genomes]
rs72701659	1.00[AFR][1000 genomes]
rs72701664	1.00[AFR][1000 genomes]
rs72701670	1.00[AFR][1000 genomes]
rs72701672	1.00[AFR][1000 genomes]
rs72701673	1.00[AFR][1000 genomes]
rs72701675	1.00[AFR][1000 genomes]
rs72701694	0.91[ASN][1000 genomes]
rs72703611	0.89[ASN][1000 genomes]
rs72703619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72703624	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72703639	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72703653	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72703657	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72703674	0.82[EUR][1000 genomes]
rs72703686	0.82[EUR][1000 genomes]
rs7656675	1.00[AFR][1000 genomes]
rs7657847	1.00[AFR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166326800-166364400	Weak transcription	Brain Germinal Matrix	brain
2	chr4:166342800-166364000	Weak transcription	HepG2	liver
3	chr4:166352600-166366400	Weak transcription	Pancreas	Pancrea
4	chr4:166359400-166362600	Enhancers	Fetal Brain Female	brain
5	chr4:166359800-166362600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr4:166359800-166363000	Enhancers	Fetal Brain Male	brain
7	chr4:166360000-166365400	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr4:166360200-166363000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr4:166360800-166363000	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr4:166361200-166362800	Enhancers	Duodenum Smooth Muscle	Duodenum
11	chr4:166361400-166362600	Active TSS	Pancreatic Islets	Pancreatic Islet
12	chr4:166361600-166362800	Enhancers	Placenta	Placenta
13	chr4:166361800-166375200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr4:166362000-166362600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr4:166362000-166362800	Enhancers	iPS-15b Cell Line	embryonic stem cell
16	chr4:166362200-166362600	Enhancers	Hela-S3	cervix
17	chr4:166362200-166381600	Weak transcription	Fetal Stomach	stomach
18	chr4:166362400-166362600	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr4:166362400-166362800	Enhancers	Brain Anterior Caudate	brain
20	chr4:166362400-166363400	Weak transcription	HMEC	breast
21	chr4:166362400-166367600	Weak transcription	Brain Hippocampus Middle	brain
22	chr4:166362400-166381600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr4:166362400-166382400	Weak transcription	Aorta	Aorta
24	chr4:166362400-166384600	Weak transcription	Brain Cingulate Gyrus	brain

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